RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 EPB41L4AQ9HCS5 686 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-212ENST00000591126 NLRC4Q9NPP4 1024 aa6.67□□□□□ -1.34
SMAD4-212ENST00000591126 MTMR6Q9Y217 621 aa6.67□□□□□ -1.34
SMAD4-212ENST00000591126 IRS2Q9Y4H2 1338 aa6.67□□□□□ -1.34
SMAD4-212ENST00000591126 A0A1W2PQ67 120 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 C1QTNF3-AMACRE9PGA6 284 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 FOXD2O60548 495 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SERPING1P05155 500 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 MMP3P08254 477 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 FAM163BP0C2L3 166 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 VDRP11473 427 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ELNP15502 786 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 GNSP15586 552 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PSMA2P25787 234 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PMLP29590 882 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 HPDP32754 393 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 POLR2FP61218 127 aaKnown RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 POU5F1BQ06416 359 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SULT2A1Q06520 285 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 LAMTOR4Q0VGL1 99 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 NCOA4Q13772 614 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 GRB14Q14449 540 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 WDR72Q3MJ13 1102 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 LONRF3Q496Y0 759 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 C10orf120Q5SQS8 335 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 STOX1Q6ZVD7 989 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ENOX1Q8TC92 643 aaKnown RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SLC20A1Q8WUM9 679 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 NELL2Q99435 816 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ADAM22Q9P0K1 906 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PHRF1Q9P1Y6 1649 aaKnown RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 CNTNAP1P78357 1384 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TJP3O95049 919 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PGK1P00558 417 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 CYP2C18P33260 490 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SLC1A1P43005 524 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 BCAT1P54687 386 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ZBED6P86452 979 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 FBXO47Q5MNV8 452 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ERAP2Q6P179 960 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 LEKR1Q6ZMV7 388 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TDRD5Q8NAT2 981 aaKnown RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SKA2Q8WVK7 121 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PLCB1Q9NQ66 1216 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TAB2Q9NYJ8 693 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TBX20Q9UMR3 447 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 UBIAD1Q9Y5Z9 338 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PTCH2Q9Y6C5 1203 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ROBO3Q96MS0 1386 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 IGF2BP3O00425 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 MAN2B1O00754 1011 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 MSH4O15457 936 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TDP2O95551 362 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 GCKP35557 465 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 GJA9P57773 515 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TROAPQ12815 778 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 FAM171A1Q5VUB5 890 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TPGS2Q68CL5 300 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TIGD7Q6NT04 549 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 MTHFD1LQ6UB35 978 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 UNC93AQ86WB7 457 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TEKT4Q8WW24 435 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ARL8AQ96BM9 186 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 RAD9AQ99638 391 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ATXN3LQ9H3M9 355 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 HAUS4Q9H6D7 363 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 HSPBP1Q9NZL4 362 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 RGS17Q9UGC6 210 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ASIC3Q9UHC3 531 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 CFAP69A5D8W1 941 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SMAPO00193 183 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 SDHBP21912 280 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PTGS1P23219 599 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 KELP23276 732 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 GNA15P30679 374 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 AP1B1Q10567 949 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 NR5A1Q13285 461 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 RESP18Q5W5W9 173 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 NUGGCQ68CJ6 796 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 KLC3Q6P597 504 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 AVL9Q8NBF6 648 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 CARD6Q9BX69 1037 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 MUC3BQ9H195 1237 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 UNC93B1Q9H1C4 597 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 UNC45AQ9H3U1 944 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 PARVAQ9NVD7 372 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 TMEM161AQ9NX61 479 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 IFNKQ9P0W0 207 aa6.66□□□□□ -1.34
SMAD4-212ENST00000591126 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
SMAD4-212ENST00000591126 ADGRA2Q96PE1 1338 aa6.65□□□□□ -1.34
SMAD4-212ENST00000591126 SYNJ2BP-COX16A0A087WUM0 186 aa6.65□□□□□ -1.34
SMAD4-212ENST00000591126 CLIC2O15247 247 aa6.65□□□□□ -1.34
SMAD4-212ENST00000591126 APODP05090 189 aa6.65□□□□□ -1.34
SMAD4-212ENST00000591126 CYP3A5P20815 502 aa6.65□□□□□ -1.34
SMAD4-212ENST00000591126 UBA1P22314 1058 aaKnown RBP6.65□□□□□ -1.34
SMAD4-212ENST00000591126 CCL23P55773 120 aa6.65□□□□□ -1.34
SMAD4-212ENST00000591126 POLR2LP62875 67 aaKnown RBP6.65□□□□□ -1.34
SMAD4-212ENST00000591126 IQCB1Q15051 598 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 1216.7 ms