RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 NUB1Q9Y5A7 615 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 BACE2Q9Y5Z0 518 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 TECTAO75443 2155 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 FAM237AA0A1B0GTK4 181 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 PVALEFA0A1B0GWK0 134 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 EIF3DO15371 548 aaKnown RBP eCLIP11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 RFPL2O75678 378 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 PAPLNO95428 1278 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 LDHAP00338 332 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 NFICP08651 508 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 MCM4P33991 863 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 OR1D2P34982 312 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 HOXD13P35453 343 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 NUCB2P80303 420 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 RAB33AQ14088 237 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 MRPL58Q14197 206 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 GRAMD1CQ8IYS0 662 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 KREMEN2Q8NCW0 462 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 ZSWIM2Q8NEG5 633 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 BEST2Q8NFU1 509 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 PAGE5Q96GU1 130 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 CBWD1Q9BRT8 395 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 FAM213AQ9BRX8 229 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 RHOBTB2Q9BYZ6 727 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 PCIF1Q9H4Z3 704 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 GDPD2Q9HCC8 539 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 FBXW11Q9UKB1 542 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 DERAQ9Y315 318 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 C2CD2Q9Y426 696 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 CDY1Q9Y6F8 540 aa11.14□□□□□ -0.63
PPP4R1-220ENST00000581835 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 A0A1W2PQD8 194 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 ANO9A1A5B4 782 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 GOLGA8IPA6NC78 632 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 GOLGA8JA6NMD2 632 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 M0QZQ0 153 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 PPEF2O14830 753 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 DCXO43602 365 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 KLRC4O43908 158 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 TBC1D4O60343 1298 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 ZMYND10O75800 440 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 ALADP13716 330 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 SP100P23497 879 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 SYKP43405 635 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 AARSP49588 968 aaKnown RBP eCLIP11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 NDUFA8P51970 172 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 WNT7BP56706 349 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 TMEM132DQ14C87 1099 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 SLC8B1Q6J4K2 584 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 ARMCX5Q6P1M9 558 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 CYP26C1Q6V0L0 522 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 BRSK2Q8IWQ3 736 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 EFCAB13Q8IY85 973 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 SCFD1Q8WVM8 642 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 ZNF707Q96C28 371 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 C1QTNF1Q9BXJ1 281 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 ZDHHC7Q9NXF8 308 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 NR2E1Q9Y466 385 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 NOTCH4Q99466 2003 aa11.13□□□□□ -0.63
PPP4R1-220ENST00000581835 C2CD4DB7Z1M9 353 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 H7C4K7 107 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 PIRO00625 290 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 KIAA0391O15091 583 aaKnown RBP11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 TGFB1I1O43294 461 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 EXTL3O43909 919 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 IL18RAPO95256 599 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 LILRA4P59901 499 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 NT5DC4Q86YG4 428 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 GPD1LQ8N335 351 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 APPL2Q8NEU8 664 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 PRKD2Q9BZL6 878 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 SLC39A2Q9NP94 309 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 DPP3Q9NY33 737 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 FBXL5Q9UKA1 691 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 USTQ9Y2C2 406 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 ZDBF2Q9HCK1 2354 aa11.12□□□□□ -0.63
PPP4R1-220ENST00000581835 UBE4BO95155 1302 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 WDR27A2RRH5 827 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 SPTLC1O15269 473 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 ABLIM3O94929 683 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 MYL1P05976 194 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 C8AP07357 584 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 PAX3P23760 479 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 HOXA9P31269 272 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 ROR1Q01973 937 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 BMT2Q1RMZ1 405 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 UVSSAQ2YD98 709 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms