RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 FAM124BQ9H5Z6 455 aaPredicted RBP11.23□□□□□ -0.61
CCDC47-203ENST00000580986 CWH43Q9H720 699 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 NRDE2Q9H7Z3 1164 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 AAASQ9NRG9 546 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 DPP3Q9NY33 737 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 INPP5FQ9Y2H2 1132 aa11.23□□□□□ -0.61
CCDC47-203ENST00000580986 C5orf67F2Z3F1 127 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 PIRO00625 290 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 ZC3H11AO75152 810 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 DDHD2O94830 711 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 MTIF2P46199 727 aaKnown RBP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 FMO5P49326 533 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 AARSP49588 968 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 TFAMQ00059 246 aaKnown RBP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 SOX4Q06945 474 aaPredicted RBP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 PPP3CAQ08209 521 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 CETN1Q12798 172 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 KRT31Q15323 416 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 VWA3BQ502W6 1294 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 DCAF17Q5H9S7 520 aaPredicted RBP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 TCERG1LQ5VWI1 586 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
CCDC47-203ENST00000580986 C9orf57Q5W0N0 161 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 SV2AQ7L0J3 742 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 GPR65Q8IYL9 337 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 OR5B17Q8NGF7 314 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 ZNF516Q92618 1163 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 ZNF560Q96MR9 790 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 CXCL16Q9H2A7 254 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 NDST4Q9H3R1 872 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 TUBGCP4Q9UGJ1 667 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 SIX4Q9UIU6 781 aa11.22□□□□□ -0.61
CCDC47-203ENST00000580986 TMEM265A0A087WTH1 108 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 ARHGEF37A1IGU5 675 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 LINC01553A4QN01 128 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 EFEMP2O95967 443 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 ALDH2P05091 517 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 RB1P06400 928 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 GALTP07902 379 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 TRIM49P0CI25 452 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 TRIM49CP0CI26 452 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.61
CCDC47-203ENST00000580986 ALDH7A1P49419 539 aaKnown RBP11.21□□□□□ -0.61
CCDC47-203ENST00000580986 GATMP50440 423 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 BCAR1P56945 870 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 RBP5P82980 135 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 UVSSAQ2YD98 709 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 CBWD6Q4V339 395 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 CBWD3Q5JTY5 395 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 CBWD5Q5RIA9 395 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 DCLRE1AQ6PJP8 1040 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 SARM1Q6SZW1 724 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 KCNT2Q6UVM3 1135 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 TMCO2Q7Z6W1 182 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-203ENST00000580986 GAS2L3Q86XJ1 694 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 ZNF280BQ86YH2 543 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 SPATA18Q8TC71 538 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 C18orf25Q96B23 403 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-203ENST00000580986 ZNF558Q96NG5 402 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 POP1Q99575 1024 aaKnown RBP11.21□□□□□ -0.61
CCDC47-203ENST00000580986 PBX4Q9BYU1 374 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 MSRAQ9UJ68 235 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 DAAM1Q9Y4D1 1078 aa11.21□□□□□ -0.61
CCDC47-203ENST00000580986 MRPL42Q9Y6G3 142 aaKnown RBP11.21□□□□□ -0.61
CCDC47-203ENST00000580986 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 RBAK-RBAKDNI3L0D1 243 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 PODXLO00592 558 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 NRP1O14786 923 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 B4GALT3O60512 393 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 VNN1O95497 513 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 ASS1P00966 412 aaKnown RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 ITGB3P05106 788 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 FAM163BP0C2L3 166 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 GCLMP48507 274 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 TAF6P49848 677 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 CLCNKBP51801 687 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 COPB1P53618 953 aaKnown RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 MYL7Q01449 175 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 ELAVL2Q12926 359 aaKnown RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 MYO1EQ12965 1108 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 NCOA4Q13772 614 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 SGSM1Q2NKQ1 1148 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 SV2CQ496J9 727 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 FILIP1LQ4L180 1135 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 PAN2Q504Q3 1202 aaKnown RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 EPC2Q52LR7 807 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 FAM117BQ6P1L5 589 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 DPH6Q7L8W6 267 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 RNF168Q8IYW5 571 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 555.4 ms