RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 GRB10Q13322 594 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 SNAPC2Q13487 334 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PRKG1Q13976 671 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 GRM2Q14416 872 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 MAPRE2Q15555 327 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 TMEM266Q2M3C6 531 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 CWF19L2Q2TBE0 894 aaKnown RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 C2orf76Q3KRA6 126 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 BBS9Q3SYG4 887 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 FBXO48Q5FWF7 155 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 TCTE1Q5JU00 501 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 DGKKQ5KSL6 1271 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 FKBP15Q5T1M5 1219 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 POMZP3Q6PJE2 187 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 RFX8Q6ZV50 586 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZNF771Q7L3S4 317 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 NUP54Q7Z3B4 507 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 DPP9Q86TI2 863 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ANKLE2Q86XL3 938 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 KRT73Q86Y46 540 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 WFDC3Q8IUB2 231 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 NOSTRINQ8IVI9 506 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PALM2Q8IXS6 379 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 RPAP2Q8IXW5 612 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 LSMEM2Q8N112 164 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 CNTROBQ8N137 903 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PDCL2Q8N4E4 241 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 MYCT1Q8N699 235 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC4A11Q8NBS3 891 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 FLAD1Q8NFF5 587 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 IL17RDQ8NFM7 739 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 TTLL11Q8NHH1 800 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 RFWD2Q8NHY2 731 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ASB11Q8WXH4 323 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PIBF1Q8WXW3 757 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 HPS3Q969F9 1004 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 OSBP2Q969R2 916 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 SDCCAG3Q96C92 435 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 TUBGCP3Q96CW5 907 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 C11orf24Q96F05 449 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 FUBP3Q96I24 572 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 RBM17Q96I25 401 aaKnown RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 CNOT6LQ96LI5 555 aaKnown RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZSCAN31Q96LW9 406 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ACAP3Q96P50 834 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 FANCD2OSQ96PS1 177 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 TSGA10Q9BZW7 698 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 MTFR1LQ9H019 292 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 VPS11Q9H270 941 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZNF576Q9H609 170 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PSTPIP2Q9H939 334 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PDE11AQ9HCR9 933 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 RXFP3Q9NSD7 469 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 DDX18Q9NVP1 670 aaKnown RBP4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 ADPRHL2Q9NX46 363 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 CRIM1Q9NZV1 1036 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 EMC3Q9P0I2 261 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 DENND2AQ9ULE3 1009 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 DNM3Q9UQ16 869 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 PTPN22Q9Y2R2 807 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 SNX11Q9Y5W9 270 aa4.86□□□□□ -1.63
HMGB3P26-201ENST00000560051 TARSL2A2RTX5 802 aaKnown RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 E9PMD0 336 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 NDUFS8O00217 210 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 LSM1O15116 133 aaKnown RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 RIPK2O43353 540 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 XPOTO43592 962 aaKnown RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 GADD45BO75293 160 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 DNAJC8O75937 253 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 PRKD3O94806 890 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 LTFP02788 710 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 HRGP04196 525 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 SRGAP2CP0DJJ0 459 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 RLBP1P12271 317 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 HSPA6P17066 643 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 RHCEP18577 417 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 ITIH2P19823 946 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 EEF1DP29692 281 aaKnown RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 HOXA11P31270 313 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 CA8P35219 290 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 CD96P40200 585 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 AFMP43652 599 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 NR2C2P49116 596 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 LIG3P49916 1009 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 VCPP55072 806 aaKnown RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC26A5P58743 744 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 CD83Q01151 205 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 RHDQ02161 417 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 SPAG1Q07617 926 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 KLHL30Q0D2K2 578 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 GALNT1Q10472 559 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 BFSP1Q12934 665 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 BNIP1Q12981 228 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 IKZF1Q13422 519 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 STIM1Q13586 685 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 AUHQ13825 339 aaKnown RBP4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 BLMHQ13867 455 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 INAVAQ3KP66 663 aa4.85□□□□□ -1.63
HMGB3P26-201ENST00000560051 MMEL1Q495T6 779 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms