RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PRRG1O14668 218 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF197O14709 1029 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 OGTO15294 1046 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PI15O43692 258 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 FAM189A1O60320 539 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 GFRA3O60609 400 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 ECI2O75521 394 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 OAZ2O95190 189 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 LRG1P02750 347 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 RHOP08100 348 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 CXCL8P10145 99 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PTPN2P17706 415 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PLCG1P19174 1290 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 ELF1P32519 619 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 MCM4P33991 863 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 LIG4P49917 911 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 NTHL1P78549 312 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 GTF2BQ00403 316 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PFKPQ01813 784 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 POU5F1Q01860 360 aaKnown RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PRKCQQ04759 706 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PPP2R3AQ06190 1150 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF280DQ6N043 979 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PARM1Q6UWI2 310 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 GPBP1Q86WP2 473 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 NPAS3Q8IXF0 933 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 LEMD2Q8NC56 503 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 BEST2Q8NFU1 509 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 ITFG1Q8TB96 612 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 LRRC15Q8TF66 581 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 RAD54LQ92698 747 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 DDX12PQ92771 950 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 FGF14Q92915 247 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 SNX21Q969T3 373 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 C18orf25Q96B23 403 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 BICD1Q96G01 975 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 SHDQ96IW2 340 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PLIN2Q99541 437 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 DDX23Q9BUQ8 820 aaKnown RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 OSBPL6Q9BZF3 934 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 HAPLN2Q9GZV7 340 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 SEMA4AQ9H3S1 761 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 TBC1D17Q9HA65 648 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 FAM86C1Q9NVL1 165 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 STK17AQ9UEE5 414 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 AFF4Q9UHB7 1163 aaKnown RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 FBXL5Q9UKA1 691 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 TBX20Q9UMR3 447 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 UBQLN1Q9UMX0 589 aaKnown RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PCDHB8Q9UN66 801 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 POLIQ9UNA4 740 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 MRPS23Q9Y3D9 190 aaKnown RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 INSL5Q9Y5Q6 135 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 MORC2Q9Y6X9 1032 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 PTPRDP23468 1912 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 EP300Q09472 2414 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-203ENST00000554074 RALGAPA1Q6GYQ0 2036 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 WDR87Q6ZQQ6 2873 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 ANAPC1Q9H1A4 1944 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 NPHP3-ACAD11A0A0J9YXS1 232 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 OR6C75A6NL08 312 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 K7ENM7 598 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 HNRNPDLO14979 420 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 TRAK2O60296 914 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 TBCAO75347 108 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 FAM13AO94988 1023 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 HARSP12081 509 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 TYMPP19971 482 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 RFX1P22670 979 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 DDIT3P35638 169 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 MATR3P43243 847 aaKnown RBP eCLIP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 MAGEA9P43362 315 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 EPHA5P54756 1037 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 GPC5P78333 572 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 MCM6Q14566 821 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 KARSQ15046 597 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 PTPAQ15257 358 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 ANGPT1Q15389 498 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 SF3A1Q15459 793 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 CTXN3Q4LDR2 81 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 PRSS36Q5K4E3 855 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 SPATA1Q5VX52 437 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 SLFN12LQ6IEE8 588 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 MAP4K3Q8IVH8 894 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 MYCT1Q8N699 235 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 PJA1Q8NG27 643 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 LARP4BQ92615 738 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 HVCN1Q96D96 273 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 KIF12Q96FN5 646 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 BORCS6Q96GS4 357 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 FIZ1Q96SL8 496 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 RPP25Q9BUL9 199 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 ASB7Q9H672 318 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 RPF1Q9H9Y2 349 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 HCFC1R1Q9NWW0 138 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 DLGAP2Q9P1A6 1054 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms