RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RIPOR3Q96MK2 946 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 KCNC2Q96PR1 638 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 OR14A2Q96R54 314 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 ZNF287Q9HBT7 754 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-210ENST00000553455 RLIMQ9NVW2 624 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 PLA2G3Q9NZ20 509 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 OGDHLQ9ULD0 1010 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 DMTF1Q9Y222 760 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 SH3BP1Q9Y3L3 701 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 SNX13Q9Y5W8 968 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 SLC30A1Q9Y6M5 507 aa6.39□□□□□ -1.39
SYNE2-210ENST00000553455 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 ABHD16AO95870 558 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 POMCP01189 267 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 GNAI3P08754 354 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 INHBBP09529 407 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 SLC6A2P23975 617 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 GNAI1P63096 354 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 NOMO3P69849 1222 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 FOXL1Q12952 345 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 UBXN2BQ14CS0 331 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 TCTN3Q6NUS6 607 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 DPP9Q86TI2 863 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 FAM83AQ86UY5 434 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 SKAP1Q86WV1 359 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 CERS3Q8IU89 383 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 ELOA2Q8IYF1 753 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-210ENST00000553455 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 NLGN4YQ8NFZ3 816 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-210ENST00000553455 OR52N2Q8NGI0 321 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 DEPTORQ8TB45 409 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 TFAP2CQ92754 450 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 SUCLG2Q96I99 432 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 UNKQ9C0B0 810 aaKnown RBP6.38□□□□□ -1.39
SYNE2-210ENST00000553455 BRD9Q9H8M2 597 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 SMURF2Q9HAU4 748 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 PLCB1Q9NQ66 1216 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 COL20A1Q9P218 1284 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 CFAP97Q9P2B7 532 aa6.38□□□□□ -1.39
SYNE2-210ENST00000553455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.38□□□□□ -1.39
SYNE2-210ENST00000553455 CDHR4A6H8M9 788 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 DBX1A6NMT0 343 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 FOXN3O00409 490 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-210ENST00000553455 IFRD1O00458 451 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-210ENST00000553455 NCK2O43639 380 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 RAD17O75943 681 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 DNAJB5O75953 348 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 RARBP10826 455 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 ALAS1P13196 640 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 TNFSF4P23510 183 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 TBC1D10BQ4KMP7 808 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-210ENST00000553455 ATXN7L2Q5T6C5 722 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-210ENST00000553455 PDSS2Q86YH6 399 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 FUKQ8N0W3 1084 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 MDGA1Q8NFP4 955 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 OR10H5Q8NGA6 315 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-210ENST00000553455 XYLT2Q9H1B5 865 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 GSTO2Q9H4Y5 243 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 GPR35Q9HC97 309 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 PTPRHQ9HD43 1115 aa6.37□□□□□ -1.39
SYNE2-210ENST00000553455 AFF4Q9UHB7 1163 aaKnown RBP6.37□□□□□ -1.39
SYNE2-210ENST00000553455 TRIM43BA6NCK2 446 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 POM121BA6NF01 834 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 PRR5-ARHGAP8B1AHC4 643 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 FOXS1O43638 330 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 PRSS23O95084 383 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 SETSIPP0DME0 302 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 GNAT2P19087 354 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 MSX2P35548 267 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 STT3AP46977 705 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 PSMC1P62191 440 aaKnown RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 HTRA4P83105 476 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 DAG1Q14118 895 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 ELAVL1Q15717 326 aaKnown RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 C3orf38Q5JPI3 329 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 FAM83BQ5T0W9 1011 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 C1QL3Q5VWW1 255 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 DRICH1Q6PGQ1 229 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 LCNL1Q6ZST4 164 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 LIX1LQ8IVB5 337 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 GIMAP8Q8ND71 665 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 TMIEQ8NEW7 156 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 VPS37AQ8NEZ2 397 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 OR6B3Q8NGW1 331 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 ZFP28Q8NHY6 868 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 ST8SIA2Q92186 375 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 TRIM43Q96BQ3 446 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 NMD3Q96D46 503 aaKnown RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 ZC3H10Q96K80 434 aaKnown RBP6.36□□□□□ -1.39
SYNE2-210ENST00000553455 MPHOSPH9Q99550 1183 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 STARD7Q9NQZ5 370 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 SRRDQ9UH36 339 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 AGAP1Q9UPQ3 857 aa6.36□□□□□ -1.39
SYNE2-210ENST00000553455 OTOL1A6NHN0 477 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-210ENST00000553455 ZNF785A8K8V0 405 aa6.35□□□□□ -1.39
SYNE2-210ENST00000553455 E9PLN8 166 aa6.35□□□□□ -1.39
SYNE2-210ENST00000553455 BTN3A1O00481 513 aa6.35□□□□□ -1.39
SYNE2-210ENST00000553455 GPR42O15529 346 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms