RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NUB1Q9Y5A7 615 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 RPSAP08865 295 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 CDH8P55286 799 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 BYSLQ13895 437 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 B3GNT9Q6UX72 402 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 APOBEC3GQ9HC16 384 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 NENFQ9UMX5 172 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 PCDHA3Q9Y5H8 950 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 NCKAP1LP55160 1127 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 GPS1Q13098 491 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 ICE2Q659A1 982 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 C11orf63Q6NUN7 778 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 MCPH1Q8NEM0 835 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 TACO1Q9BSH4 297 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 OSBPL8Q9BZF1 889 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 FHDC1Q9C0D6 1143 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 KIF9Q9HAQ2 790 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 EIF3BP55884 814 aaKnown RBP14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 MYL6P60660 151 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 GJC2Q5T442 439 aaPredicted RBP14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 TXNRD3NBQ6F5E7 133 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 AGBL3Q8NEM8 1001 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 TMEM121Q9BTD3 319 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 PCDHB2Q9Y5E7 798 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 ANKRD31Q8N7Z5 1873 aa14.52□□□□□ -0.08
PRPF40B-209ENST00000548825 GZMAP12544 262 aa14.52□□□□□ -0.09
PRPF40B-209ENST00000548825 C6orf118Q5T5N4 469 aa14.52□□□□□ -0.09
PRPF40B-209ENST00000548825 MOB2Q70IA6 237 aa14.52□□□□□ -0.09
PRPF40B-209ENST00000548825 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.09
PRPF40B-209ENST00000548825 ACAD9Q9H845 621 aa14.52□□□□□ -0.09
PRPF40B-209ENST00000548825 TJP2Q9UDY2 1190 aa14.52□□□□□ -0.09
PRPF40B-209ENST00000548825 A6NNZ2 444 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 RFX1P22670 979 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ERFP50548 548 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 TUBB8Q3ZCM7 444 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 TAS1R3Q7RTX0 852 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 PRPF31Q8WWY3 499 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 STRA6Q9BX79 667 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 CALN1Q9BXU9 219 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 EPB41L4BQ9H329 900 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ZNF541Q9H0D2 1346 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 GGPS1O95749 300 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 TMEM191BP0C7N4 346 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 PTPRAP18433 802 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 AUHQ13825 339 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 PPP2R5EQ16537 467 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 AGBL2Q5U5Z8 902 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 DNAJC24Q6P3W2 148 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 KIRREL3Q8IZU9 778 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 HSPH1Q92598 858 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 OTUD5Q96G74 571 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 RPS6KC1Q96S38 1066 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 SLC40A1Q9NP59 571 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ANKEF1Q9NU02 776 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 UVRAGQ9P2Y5 699 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 DIS3Q9Y2L1 958 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 IVNS1ABPQ9Y6Y0 642 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 MROH7Q68CQ1 1323 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 RASA4BC9J798 803 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 RASA4O43374 803 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 GLRA2P23416 452 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 CETN2P41208 172 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ARSEP51690 589 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 LACTBP83111 547 aaPredicted RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 CUL2Q13617 745 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 SLMAPQ14BN4 828 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 FASTKD3Q14CZ7 662 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 STXBP2Q15833 593 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 SEPT7Q16181 437 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 TAOK1Q7L7X3 1001 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ANKS1BQ7Z6G8 1248 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 EXOC3L1Q86VI1 746 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ZBED8Q8IZ13 594 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 CYP4X1Q8N118 509 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 TRPM4Q8TD43 1214 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 TEPSINQ96N21 525 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 RBM15Q96T37 977 aaKnown RBP eCLIP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 C12orf65Q9H3J6 166 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 ABCF3Q9NUQ8 709 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 CYP39A1Q9NYL5 469 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 DNPEPQ9ULA0 475 aa14.51□□□□□ -0.09
PRPF40B-209ENST00000548825 EXOC1LA0A1B0GW35 172 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 KCNA2P16389 499 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 YY1P25490 414 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 GPC3P51654 580 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 GPAT2Q6NUI2 795 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 SCYL2Q6P3W7 929 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 COPS5Q92905 334 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 SNF8Q96H20 258 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 NKIRAS1Q9NYS0 192 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 KCNV1Q6PIU1 500 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 MFSD7Q6UXD7 560 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 HAPLN2Q9GZV7 340 aa14.5□□□□□ -0.09
PRPF40B-209ENST00000548825 P4HA2O15460 535 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms