RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 DSTYKQ6XUX3 929 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 MAP4K3Q8IVH8 894 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 TCEAL8Q8IYN2 117 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 SIX5Q8N196 739 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 ELMOD1Q8N336 334 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 TMEM105Q8N8V8 129 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 BEST2Q8NFU1 509 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 DDX12PQ92771 950 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 FGF13Q92913 245 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 HVCN1Q96D96 273 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 ASB7Q9H672 318 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 CYP4F11Q9HBI6 524 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 SLC2A4RGQ9NR83 387 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 GDE1Q9NZC3 331 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 DNMT3BQ9UBC3 853 aaKnown RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 SEL1LQ9UBV2 794 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 TUBGCP4Q9UGJ1 667 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 AFF4Q9UHB7 1163 aaKnown RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 EXOC7Q9UPT5 735 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 DERAQ9Y315 318 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 MRPS23Q9Y3D9 190 aaKnown RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 NUMBLQ9Y6R0 609 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 ZDBF2Q9HCK1 2354 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 OR6C75A6NL08 312 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 M0QZQ0 153 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 STX6O43752 255 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 NARSO43776 548 aaKnown RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 OAZ2O95190 189 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 CPB1P15086 417 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 TNFSF9P41273 254 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 YWHAHQ04917 246 aaPredicted RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 SPAG1Q07617 926 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 ENOX2Q16206 610 aaKnown RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 CYP4A22Q5TCH4 519 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 SPATA1Q5VX52 437 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 ADALQ6DHV7 355 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 USP49Q70CQ1 688 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 DYMQ7RTS9 669 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 ZNF720Q7Z2F6 126 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 LRRC15Q8TF66 581 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 SHDQ96IW2 340 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 ZNF512Q96ME7 567 aaPredicted RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 ZNF396Q96N95 335 aaPredicted RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 FIZ1Q96SL8 496 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 LRRC27Q9C0I9 530 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 HAPLN2Q9GZV7 340 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 MRPL44Q9H9J2 332 aaKnown RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 AVENQ9NQS1 362 aaPredicted RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 CPSF3Q9UKF6 684 aaKnown RBP10.17□□□□□ -0.78
YBX3-218ENST00000546298 MTMR6Q9Y217 621 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 INSL5Q9Y5Q6 135 aa10.17□□□□□ -0.78
YBX3-218ENST00000546298 WDR27A2RRH5 827 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 H0Y858 1186 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 FAM189A1O60320 539 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 MICAL2O94851 1124 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 RHOP08100 348 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 NPR3P17342 541 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 TYMPP19971 482 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 STAT6P42226 847 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 NASPP49321 788 aaPredicted RBP10.16□□□□□ -0.78
YBX3-218ENST00000546298 AARSP49588 968 aaKnown RBP eCLIP10.16□□□□□ -0.78
YBX3-218ENST00000546298 PFKPQ01813 784 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ADCY1Q08828 1119 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ALCAMQ13740 583 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 TMEM132DQ14C87 1099 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 STK38Q15208 465 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ZC2HC1CQ53FD0 456 aaPredicted RBP10.16□□□□□ -0.78
YBX3-218ENST00000546298 ZBTB41Q5SVQ8 909 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 CWF19L1Q69YN2 538 aaKnown RBP10.16□□□□□ -0.78
YBX3-218ENST00000546298 JADE1Q6IE81 842 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 PHLDB3Q6NSJ2 640 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ARMCX5Q6P1M9 558 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 FAM173BQ6P4H8 233 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 PARM1Q6UWI2 310 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 SFR1Q86XK3 245 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 LEMD2Q8NC56 503 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ITFG1Q8TB96 612 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 GPR152Q8TDT2 470 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 SNX21Q969T3 373 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 CLIC6Q96NY7 704 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 USP28Q96RU2 1077 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 ARHGEF3Q9NR81 526 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 HCFC1R1Q9NWW0 138 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 AGO2Q9UKV8 859 aaKnown RBP10.16□□□□□ -0.78
YBX3-218ENST00000546298 C2CD2Q9Y426 696 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 PCDHB13Q9Y5F0 798 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 STYXL1Q9Y6J8 313 aa10.16□□□□□ -0.78
YBX3-218ENST00000546298 PIEZO1Q92508 2521 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 ANKRD63C9JTQ0 380 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 ECI2O75521 394 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 IL18RAPO95256 599 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 SEC24AO95486 1093 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 HSP90AA1P07900 732 aaKnown RBP10.15□□□□□ -0.78
YBX3-218ENST00000546298 IDEP14735 1019 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 ACOT2P49753 483 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms