RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 SRGAP2O75044 1071 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 CIAO1O76071 339 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 LCA5LO95447 670 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 SLC25A27O95847 323 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 SNAI1O95863 264 aaPredicted RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 MYBP10242 640 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ACTN1P12814 892 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ACADSP16219 412 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ATP6V1C1P21283 382 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 EIF4A3P38919 411 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 MXRA7P84157 204 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 GRM2Q14416 872 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 KRT31Q15323 416 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TTF1Q15361 905 aaPredicted RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TEAD4Q15561 434 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 GNASQ5JWF2 1037 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ACBD5Q5T8D3 534 aaPredicted RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TATDN1Q6P1N9 297 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 CPLX4Q7Z7G2 160 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 LCA5Q86VQ0 697 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 FBXL6Q8N531 539 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 RAPGEF5Q92565 580 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 HAUS7Q99871 368 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 PYM1Q9BRP8 204 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 FAM129AQ9BZQ8 928 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 IQCGQ9H095 443 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 NCOA5Q9HCD5 579 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 JADE2Q9NQC1 790 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ATXN10Q9UBB4 475 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 LUC7L2Q9Y383 392 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 NFS1Q9Y697 457 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 COL4A6Q14031 1691 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 A0A1W2PQJ5 194 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 LCHNA4D1U4 455 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 DPPA5A6NC42 116 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ENPP3O14638 875 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 PJA2O43164 708 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 KLF4O43474 513 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 B4GALT4O60513 344 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 HLA-DOAP06340 250 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 RANBP1P43487 201 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 EIF3BP55884 814 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ATP11AP98196 1134 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 DHX9Q08211 1270 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 KCTD2Q14681 263 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TAF11Q15544 211 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 DBN1Q16643 649 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 C21orf62-AS1Q17RA5 79 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 GALNTL6Q49A17 601 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 CFAP221Q4G0U5 840 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ANO7Q6IWH7 933 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TRIM67Q6ZTA4 783 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TRPM8Q7Z2W7 1104 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 CROCCP2Q86T23 111 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 FAM169BQ8N8A8 192 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 KBTBD3Q8NAB2 608 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 RASGRP4Q8TDF6 673 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TGFBRAP1Q8WUH2 860 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 HDAC7Q8WUI4 952 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 NCSTNQ92542 709 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ATG4CQ96DT6 458 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 FRMD6Q96NE9 622 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ZNF317Q96PQ6 595 aaPredicted RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 CHP1Q99653 195 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 KRT23Q9C075 422 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 NSRP1Q9H0G5 558 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 VCX3BQ9H321 246 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 BOLA2Q9H3K6 86 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 SH2D4AQ9H788 454 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 VCX3AQ9NNX9 186 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 ARHGEF3Q9NR81 526 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 DDX56Q9NY93 547 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 TRIM10Q9UDY6 481 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 SAP30BPQ9UHR5 308 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 FBXO2Q9UK22 296 aaPredicted RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 PLAAQ9Y263 795 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 C2CD2Q9Y426 696 aa4.94□□□□□ -1.62
CNGA1-209ENST00000544810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 SRPRBQ9Y5M8 271 aaKnown RBP4.94□□□□□ -1.62
CNGA1-209ENST00000544810 NID2Q14112 1375 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 O00370 1275 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 CPLX1O14810 134 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 ZNF185O15231 689 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 TPD52L2O43399 206 aaKnown RBP4.93□□□□□ -1.62
CNGA1-209ENST00000544810 CABYRO75952 493 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 S100BP04271 92 aaPredicted RBP4.93□□□□□ -1.62
CNGA1-209ENST00000544810 CLTAP09496 248 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 GNAZP19086 355 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 EEF1GP26641 437 aaKnown RBP4.93□□□□□ -1.62
CNGA1-209ENST00000544810 HNRNPH3P31942 346 aaKnown RBP4.93□□□□□ -1.62
CNGA1-209ENST00000544810 GBP1P32455 592 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 PHKA2P46019 1235 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 IDH3AP50213 366 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 VCPP55072 806 aaKnown RBP4.93□□□□□ -1.62
CNGA1-209ENST00000544810 ERVK-21P61565 698 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 RELBQ01201 579 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 KLC1Q07866 573 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 ITGA7Q13683 1181 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 TMEM132BQ14DG7 1078 aa4.93□□□□□ -1.62
CNGA1-209ENST00000544810 TKFCQ3LXA3 575 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms