RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CCDC8Q9H0W5 538 aaPredicted RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 SFXN1Q9H9B4 322 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 CPNE5Q9HCH3 593 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 ABCB6Q9NP58 842 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 DDX4Q9NQI0 724 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 EVLQ9UI08 416 aaPredicted RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZBTB21Q9ULJ3 1066 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 PPM1HQ9ULR3 514 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 PHTF1Q9UMS5 762 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 NDRG2Q9UN36 371 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 NUMBLQ9Y6R0 609 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 RAD50Q92878 1312 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 ACANP16112 2415 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 FITM1A5D6W6 292 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ASB14A6NK59 587 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ENPP3O14638 875 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF862O60290 1169 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 FLOT1O75955 427 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ECEL1O95672 775 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 DDAH2O95865 285 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 LDHBP07195 334 aaKnown RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ENGP17813 658 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 GSTT1P30711 240 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ACTN2P35609 894 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 CD96P40200 585 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 THPOP40225 353 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ETV3P41162 512 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 BUD31P41223 144 aaPredicted RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 PLCB3Q01970 1234 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 CHRNEQ04844 493 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 APOBRQ0VD83 1088 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 SLC14A1Q13336 389 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 SMC1AQ14683 1233 aaKnown RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 TMEM63BQ5T3F8 832 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 CYP26C1Q6V0L0 522 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 HDXQ7Z353 690 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 GLRX5Q86SX6 157 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 DDX53Q86TM3 631 aaKnown RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 SLCO6A1Q86UG4 719 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 PPFIBP1Q86W92 1011 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 C12orf40Q86WS4 652 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 MARCH9Q86YJ5 346 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 SPPL2CQ8IUH8 684 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 CILP2Q8IUL8 1156 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 C7orf31Q8N865 590 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 EXD3Q8N9H8 876 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 CCDC74AQ96AQ1 378 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATG4CQ96DT6 458 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 PHACTR3Q96KR7 559 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 SEMA3CQ99985 751 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 DUSP15Q9H1R2 295 aaPredicted RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 WDR6Q9NNW5 1121 aaKnown RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ANO2Q9NQ90 1003 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 DONSONQ9NYP3 566 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 SLAMF8Q9P0V8 285 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 TMEM59LQ9UK28 342 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZFP37Q9Y6Q3 630 aaPredicted RBP2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 PTPRBP23467 1997 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZMYM6O95789 1325 aa2.65□□□□□ -1.99
TRAV1-1-201ENST00000542354 MUC22E2RYF6 1773 aaPredicted RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 FAM149AA5PLN7 773 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 C2orf71A6NGG8 1288 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 TMEM200CA6NKL6 621 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PATE3B3GLJ2 98 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PLK4O00444 970 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 U2SURPO15042 1029 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 HNRNPRO43390 633 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 SH3BP5O60239 455 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ICMTO60725 284 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CXCL14O95715 111 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 GH2P01242 217 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 NEFMP07197 916 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 STAG3L1P0CL83 205 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CD59P13987 128 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PTGS1P23219 599 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CSTF2P33240 577 aaKnown RBP eCLIP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CA8P35219 290 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 EPHA5P54756 1037 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 DUSP4Q13115 394 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 IFIT5Q13325 482 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 LRRC32Q14392 662 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 KARSQ15046 597 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 TESK1Q15569 626 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 NKPD1Q17RQ9 610 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 TRIM71Q2Q1W2 868 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 DUSP28Q4G0W2 176 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PAN2Q504Q3 1202 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 TRIM61Q5EBN2 209 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF484Q5JVG2 852 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZBTB37Q5TC79 503 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CDKAL1Q5VV42 579 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 TATDN1Q6P1N9 297 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 LDHAL6AQ6ZMR3 332 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 AGMOQ6ZNB7 445 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 MTSS1LQ765P7 747 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ARMCX6Q7L4S7 300 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 TTC6Q86TZ1 520 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 C11orf74Q86VG3 221 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ANKRD35Q8N283 1001 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 SPATA5Q8NB90 893 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms