RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SLC9A9Q8IVB4 645 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 MRPL43Q8N983 215 aaKnown RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 CGRRF1Q99675 332 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 NGRNQ9NPE2 291 aaKnown RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 CHST7Q9NS84 486 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 CGNQ9P2M7 1197 aaKnown RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 DERAQ9Y315 318 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 NUB1Q9Y5A7 615 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 TIMM13Q9Y5L4 95 aaPredicted RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 DOCK6Q96HP0 2047 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 ANO9A1A5B4 782 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 CARNS1A5YM72 827 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 LRRIQ3A6PVS8 624 aaPredicted RBP15.16■□□□□ 0.02
VPS11-205ENST00000534551 TEX28O15482 410 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 XPOTO43592 962 aaKnown RBP15.16■□□□□ 0.02
VPS11-205ENST00000534551 CLASP2O75122 1294 aaKnown RBP15.16■□□□□ 0.02
VPS11-205ENST00000534551 TMEM191BP0C7N4 346 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 TRIM49P0CI25 452 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 TRIM49CP0CI26 452 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 EPCAMP16422 314 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 CYP3A5P20815 502 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
VPS11-205ENST00000534551 STX17P56962 302 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 COBLL1Q53SF7 1204 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 KIAA0319Q5VV43 1072 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 ANKRD40Q6AI12 368 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 CENPPQ6IPU0 288 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 CXorf38Q8TB03 319 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 ZNF516Q92618 1163 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 MRPL17Q9NRX2 175 aaKnown RBP15.16■□□□□ 0.02
VPS11-205ENST00000534551 INTS13Q9NVM9 706 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 HCFC2Q9Y5Z7 792 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 DENND4AQ7Z401 1863 aa15.16■□□□□ 0.02
VPS11-205ENST00000534551 H3BQ06 376 aaPredicted RBP15.15■□□□□ 0.02
VPS11-205ENST00000534551 PIRO00625 290 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 KIF20AO95235 890 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 KRT19P08727 400 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 KCNA5P22460 613 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 FGFR3P22607 806 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 LTBRP36941 435 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 AARSP49588 968 aaKnown RBP eCLIP15.15■□□□□ 0.02
VPS11-205ENST00000534551 POU5F1Q01860 360 aaKnown RBP15.15■□□□□ 0.02
VPS11-205ENST00000534551 COL19A1Q14993 1142 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 PSMD5Q16401 504 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 NFIL3Q16649 462 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 DPCR1Q3MIW9 517 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 C1orf220Q5T0J3 134 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 PDE12Q6L8Q7 609 aaKnown RBP15.15■□□□□ 0.02
VPS11-205ENST00000534551 RSPO2Q6UXX9 243 aaPredicted RBP15.15■□□□□ 0.02
VPS11-205ENST00000534551 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
VPS11-205ENST00000534551 WDR49Q8IV35 697 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 SUSD3Q96L08 255 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 MFSD14AQ96MC6 490 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 KLHL5Q96PQ7 755 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 TTPALQ9BTX7 342 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 APOL5Q9BWW9 433 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 UBE2ZQ9H832 354 aaPredicted RBP15.15■□□□□ 0.02
VPS11-205ENST00000534551 KIAA1586Q9HCI6 787 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 CDH22Q9UJ99 828 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 VCANP13611 3396 aa15.15■□□□□ 0.02
VPS11-205ENST00000534551 PSMA7O14818 248 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 TNNI1P19237 187 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 CCNE1P24864 410 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 NDUFV1P49821 464 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 KCNC3Q14003 757 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 CTC1Q2NKJ3 1217 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 VARS2Q5ST30 1063 aaKnown RBP15.14■□□□□ 0.01
VPS11-205ENST00000534551 TTI2Q6NXR4 508 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 ZC3H3Q8IXZ2 948 aaKnown RBP15.14■□□□□ 0.01
VPS11-205ENST00000534551 FAM186BQ8IYM0 893 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 CSGALNACT2Q8N6G5 542 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 LNX1Q8TBB1 728 aaPredicted RBP15.14■□□□□ 0.01
VPS11-205ENST00000534551 PABPC5Q96DU9 382 aaKnown RBP15.14■□□□□ 0.01
VPS11-205ENST00000534551 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 FNBP1Q96RU3 617 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 DUSP9Q99956 384 aaKnown RBP15.14■□□□□ 0.01
VPS11-205ENST00000534551 MMRN2Q9H8L6 949 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 CLEC1BQ9P126 229 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 TMEM63CQ9P1W3 806 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 THEGQ9P2T0 379 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 AGAP1Q9UPQ3 857 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 IRAK3Q9Y616 596 aa15.14■□□□□ 0.01
VPS11-205ENST00000534551 KCNQ1P51787 676 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 CDR1P51861 262 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 LILRA4P59901 499 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 ELAVL2Q12926 359 aaKnown RBP15.13■□□□□ 0.01
VPS11-205ENST00000534551 BFSP1Q12934 665 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 PAK1Q13153 545 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 ADAM9Q13443 819 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 EDRF1Q3B7T1 1238 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 TDRD10Q5VZ19 366 aaKnown RBP15.13■□□□□ 0.01
VPS11-205ENST00000534551 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 NT5DC4Q86YG4 428 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms