RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 SFI1A8K8P3 1242 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 H0Y858 1186 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 SLC16A4O15374 487 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 CCL16O15467 120 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 B3GAT3O94766 335 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 C8AP07357 584 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 PRPHP41219 470 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 GRM5P41594 1212 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 CLCNKBP51801 687 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 ATP2C1P98194 919 aaPredicted RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 ELAVL2Q12926 359 aaKnown RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 PDIA5Q14554 519 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 RILPL1Q5EBL4 403 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 CWF19L1Q69YN2 538 aaKnown RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 SIX5Q8N196 739 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 C3orf58Q8NDZ4 430 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 SLC7A14Q8TBB6 771 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 SNX27Q96L92 541 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 PPP1R10Q96QC0 940 aaKnown RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 PRRX2Q99811 253 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 MRPL4Q9BYD3 311 aaKnown RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 PLEKHA4Q9H4M7 779 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 TOPORSQ9NS56 1045 aaPredicted RBP10.07□□□□□ -0.8
CKAP5-203ENST00000525248 ZDHHC7Q9NXF8 308 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 ARHGAP28Q9P2N2 729 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 DUSP12Q9UNI6 340 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
CKAP5-203ENST00000525248 NPHP3-ACAD11A0A0J9YXS1 232 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 TKTP29401 623 aaKnown RBP10.06□□□□□ -0.8
CKAP5-203ENST00000525248 BRCC3P46736 316 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 NTHL1P78549 312 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
CKAP5-203ENST00000525248 SEZ6Q53EL9 994 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 PPM1LQ5SGD2 360 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 RINT1Q6NUQ1 792 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 LILRA6Q6PI73 481 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 MPZL3Q6UWV2 235 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.06□□□□□ -0.8
CKAP5-203ENST00000525248 C1orf186Q6ZWK4 172 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 GRASPQ7Z6J2 395 aaPredicted RBP10.06□□□□□ -0.8
CKAP5-203ENST00000525248 LNX1Q8TBB1 728 aaPredicted RBP10.06□□□□□ -0.8
CKAP5-203ENST00000525248 PNMA5Q96PV4 448 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 ACO2Q99798 780 aaKnown RBP10.06□□□□□ -0.8
CKAP5-203ENST00000525248 CLSTN3Q9BQT9 956 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 TCHPQ9BT92 498 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
CKAP5-203ENST00000525248 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 TMEM189-UBE2V1I3L0A0 370 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 PODXLO00592 558 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 ABLIM1O14639 778 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 MCF2P10911 925 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 FGFR3P22607 806 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 RFX1P22670 979 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 FSHRP23945 695 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 GUCY2CP25092 1073 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 OR1D2P34982 312 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 STRN3Q13033 797 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 NNTQ13423 1086 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 NOLC1Q14978 699 aaKnown RBP eCLIP10.05□□□□□ -0.8
CKAP5-203ENST00000525248 UPP1Q16831 310 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 PDXDC1Q6P996 788 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 RSPO2Q6UXX9 243 aaPredicted RBP10.05□□□□□ -0.8
CKAP5-203ENST00000525248 CYP26C1Q6V0L0 522 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 GPR65Q8IYL9 337 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 HDAC7Q8WUI4 952 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
CKAP5-203ENST00000525248 C18orf25Q96B23 403 aaPredicted RBP10.05□□□□□ -0.8
CKAP5-203ENST00000525248 BICD1Q96G01 975 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 UROC1Q96N76 676 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
CKAP5-203ENST00000525248 C1QTNF2Q9BXJ5 285 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 RHOBTB2Q9BYZ6 727 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 PTPRHQ9HD43 1115 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 IGSF9Q9P2J2 1179 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 EPS15L1Q9UBC2 864 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 MTRRQ9UBK8 725 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 DACH1Q9UI36 760 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 CA14Q9ULX7 337 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 NUMBLQ9Y6R0 609 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
CKAP5-203ENST00000525248 WDR87Q6ZQQ6 2873 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 MEFVO15553 781 aaPredicted RBP10.04□□□□□ -0.8
CKAP5-203ENST00000525248 XYLBO75191 536 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 ADH1CP00326 375 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 PLA2G4BP0C869 781 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 CXCL8P10145 99 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 MAPTP10636 758 aaKnown RBP10.04□□□□□ -0.8
CKAP5-203ENST00000525248 PLS3P13797 630 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 PROZP22891 400 aa10.04□□□□□ -0.8
CKAP5-203ENST00000525248 MATR3P43243 847 aaKnown RBP eCLIP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms