RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 ATP11CQ8NB49 1132 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 IL17RDQ8NFM7 739 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 ADAMTS17Q8TE56 1095 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 CFHR4Q92496 578 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 IL23AQ9NPF7 189 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 MYO1AQ9UBC5 1043 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 MAGED2Q9UNF1 606 aaPredicted RBP8.89□□□□□ -0.99
NUP54-215ENST00000514313 NR2E1Q9Y466 385 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 DGKBQ9Y6T7 804 aa8.89□□□□□ -0.99
NUP54-215ENST00000514313 hCG_1642624A0A1W2PR95 340 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 FFAR3O14843 346 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 TBC1D4O60343 1298 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 GJB1P08034 283 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 RENBPP51606 427 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 IRAK1P51617 712 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 POU5F1BQ06416 359 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 BLMHQ13867 455 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 PUM3Q15397 648 aaKnown RBP8.88□□□□□ -0.99
NUP54-215ENST00000514313 FAM26FQ5R3K3 315 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 ZNF529Q6P280 563 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 TLDC1Q6P9B6 456 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 FRMD5Q7Z6J6 570 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 MICU3Q86XE3 530 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 CARFQ8N187 725 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 NDC1Q9BTX1 674 aa8.88□□□□□ -0.99
NUP54-215ENST00000514313 SLC43A1O75387 559 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 EEF1GP26641 437 aaKnown RBP8.87□□□□□ -0.99
NUP54-215ENST00000514313 NPEPPSP55786 919 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 MRPL49Q13405 166 aaKnown RBP8.87□□□□□ -0.99
NUP54-215ENST00000514313 HABP2Q14520 560 aaPredicted RBP8.87□□□□□ -0.99
NUP54-215ENST00000514313 CCDC38Q502W7 563 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 UBE3BQ7Z3V4 1068 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 NBPF11Q86T75 865 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 ZNF354CQ86Y25 554 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 TXLNBQ8N3L3 684 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 SPATA5Q8NB90 893 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 PNISRQ8TF01 805 aaKnown RBP8.87□□□□□ -0.99
NUP54-215ENST00000514313 RABGGTAQ92696 567 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 IQCDQ96DY2 449 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 SNX22Q96L94 193 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 BRD9Q9H8M2 597 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 PRDM16Q9HAZ2 1276 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 AGO4Q9HCK5 861 aaKnown RBP8.87□□□□□ -0.99
NUP54-215ENST00000514313 RLIMQ9NVW2 624 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 CFAP97Q9P2B7 532 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 CEP83Q9Y592 693 aa8.87□□□□□ -0.99
NUP54-215ENST00000514313 TLR5O60602 858 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
NUP54-215ENST00000514313 STC2O76061 302 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 ANXA2P07355 339 aaKnown RBP8.86□□□□□ -0.99
NUP54-215ENST00000514313 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 RARBP10826 455 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 PDIA3P30101 505 aaKnown RBP8.86□□□□□ -0.99
NUP54-215ENST00000514313 PSMC1P62191 440 aaKnown RBP8.86□□□□□ -0.99
NUP54-215ENST00000514313 CTBP1Q13363 440 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 BIRC3Q13489 604 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 RALBP1Q15311 655 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 ZNF568Q3ZCX4 644 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 PGBD2Q6P3X8 592 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 ZNF365Q70YC5 407 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 ZNF527Q8NB42 609 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 FANCBQ8NB91 859 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 C18orf8Q96DM3 657 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 MAF1Q9H063 256 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 SERHLQ9NQF3 203 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 CNOT6Q9ULM6 557 aaKnown RBP8.86□□□□□ -0.99
NUP54-215ENST00000514313 SLC45A2Q9UMX9 530 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 KCTD3Q9Y597 815 aa8.86□□□□□ -0.99
NUP54-215ENST00000514313 SLC26A4O43511 780 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 EIF5BO60841 1220 aaKnown RBP8.85□□□□□ -0.99
NUP54-215ENST00000514313 DNAJB5O75953 348 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 UNC5CO95185 931 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 MT-ND5P03915 603 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 CSTBP04080 98 aaKnown RBP8.85□□□□□ -0.99
NUP54-215ENST00000514313 SNRPA1P09661 255 aaKnown RBP8.85□□□□□ -0.99
NUP54-215ENST00000514313 IL1R1P14778 569 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 ALDH9A1P49189 494 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 RAP2BP61225 183 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 DUSP8Q13202 625 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 RAB32Q13637 225 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 RIN1Q13671 783 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 FAM214AQ32MH5 1076 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 ANKS6Q68DC2 871 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 GGT6Q6P531 493 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 ZNF566Q969W8 418 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 LCORQ96JN0 433 aaPredicted RBP8.85□□□□□ -0.99
NUP54-215ENST00000514313 STK33Q9BYT3 514 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 ZNF518BQ9C0D4 1074 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 MYLK2Q9H1R3 596 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 CASS4Q9NQ75 786 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 JKAMPQ9P055 326 aa8.85□□□□□ -0.99
NUP54-215ENST00000514313 UBE2QL1A1L167 161 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 ZNF785A8K8V0 405 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 TMEM233B4DJY2 109 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 MATN2O00339 956 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 FFAR2O15552 330 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 PJA2O43164 708 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 PLA2G6O60733 806 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 HAUS5O94927 633 aa8.84□□□□□ -0.99
NUP54-215ENST00000514313 GNAI2P04899 355 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms