RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 H7C1D1 291 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 GPR39O43194 453 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZEB2O60315 1214 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ABLIM3O94929 683 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 RHOBTB3O94955 611 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ABHD16AO95870 558 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 LMNAP02545 664 aaKnown RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ITGB1P05556 798 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 HSPA6P17066 643 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 GNAT2P19087 354 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 POU3F3P20264 500 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 KRT20P35900 424 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 TSPAN7P41732 249 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 IL12RB1P42701 662 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 GRK6P43250 576 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 MYBPC3Q14896 1274 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 FAM214AQ32MH5 1076 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 CCDC184Q52MB2 194 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ODF2Q5BJF6 829 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 RILPL1Q5EBL4 403 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 INTS11Q5TA45 600 aaKnown RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 BMP8AQ7Z5Y6 402 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 N4BP2L2Q92802 583 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZBTB10Q96DT7 871 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 C16orf92Q96LL3 132 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 SPAG5Q96R06 1193 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 SEC62Q99442 399 aaKnown RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 SLC26A6Q9BXS9 759 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 RTFDC1Q9BY42 306 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 RHOBTB2Q9BYZ6 727 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 HAPLN2Q9GZV7 340 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 FAM204AQ9H8W3 233 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 DBNDD1Q9H9R9 158 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 C1orf112Q9NSG2 853 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 SMC4Q9NTJ3 1288 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 NKIRAS2Q9NYR9 191 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZNHIT2Q9UHR6 403 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 TRHDEQ9UKU6 1024 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 TPCN1Q9ULQ1 816 aa4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 APOBEC2Q9Y235 224 aaKnown RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 LRRFIP2Q9Y608 721 aaKnown RBP4.11□□□□□ -1.75
HMGB3P15-201ENST00000507326 PTPDC1A2A3K4 754 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 PIP5K1CO60331 668 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 BAIAP3O94812 1187 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 AGR2O95994 175 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 CCDC159P0C7I6 412 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 RPL17P18621 184 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 LMO1P25800 156 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 PTX3P26022 381 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 KIR2DL3P43628 341 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 RECQLP46063 649 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 NEK4P51957 841 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 BCAR1P56945 870 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 KRT83P78385 493 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 IFIT5Q13325 482 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 SLMAPQ14BN4 828 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZNF174Q15697 407 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 TAF12Q16514 161 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 CCNG2Q16589 344 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 RRP12Q5JTH9 1297 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 CFAP58Q5T655 872 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 LRCH2Q5VUJ6 765 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 ITPRIPL1Q6GPH6 555 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZCCHC8Q6NZY4 707 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 LRRC55Q6ZSA7 311 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 BTN2A1Q7KYR7 527 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 PNMA8AQ86V59 439 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 ARHGEF25Q86VW2 580 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 CXorf67Q86X51 503 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 NKAIN3Q8N8D7 197 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 IL17REQ8NFR9 667 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 OR2W6PQ8NHA6 318 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 UIMC1Q96RL1 719 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 MYLK2Q9H1R3 596 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 IFT22Q9H7X7 185 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZWILCHQ9H900 591 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 NCOA5Q9HCD5 579 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 TRMT13Q9NUP7 481 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 SAP30BPQ9UHR5 308 aaKnown RBP4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 PACSIN3Q9UKS6 424 aa4.1□□□□□ -1.75
HMGB3P15-201ENST00000507326 GRID2IPA4D2P6 1211 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TRIM64A6NGJ6 449 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TRIM64BA6NI03 449 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TRIM75PA6NK02 468 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 B4E1Z4 1266 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 hCG_1984214I3L0E3 225 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CHL1O00533 1208 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 PES1O00541 588 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 FYB1O15117 783 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 PMM2O15305 246 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 PLOD3O60568 738 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TLR5O60602 858 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 SCAF4O95104 1147 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 APOL3O95236 402 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ARIH2O95376 493 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CFBP00751 764 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CYP17A1P05093 508 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 IFIT1P09914 478 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TGFB3P10600 412 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms