RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 XKR9Q5GH70 373 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 PCNX4Q63HM2 1172 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ZNF772Q68DY9 489 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ANO5Q75V66 913 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 SAMD7Q7Z3H4 446 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 SLC47A2Q86VL8 602 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 NIM1KQ8IY84 436 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 RNF168Q8IYW5 571 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 SYCE1Q8N0S2 351 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 RASGEF1CQ8N431 466 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 UHMK1Q8TAS1 419 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 USP33Q8TEY7 942 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 WHAMMQ8TF30 809 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 BTBD6Q96KE9 485 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 RMDN2Q96LZ7 410 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 TEPSINQ96N21 525 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 AGPAT1Q99943 283 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 TMEM206Q9H813 350 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 CTTNBP2NLQ9P2B4 639 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 INTUQ9ULD6 942 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 UBIAD1Q9Y5Z9 338 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ALG6Q9Y672 507 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 UBE4BO95155 1302 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 RPTORQ8N122 1335 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 BRCA2P51587 3418 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 LSM1O15116 133 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 WDR46O15213 610 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 CYP26A1O43174 497 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 LUC7L3O95232 432 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 PDHA1P08559 390 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ALADP13716 330 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ANXA13P27216 316 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 CTNNA1P35221 906 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 OXCT1P55809 520 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 TMED1Q13445 227 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 SNRNP35Q16560 246 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 CCDC38Q502W7 563 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 EPC2Q52LR7 807 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ANKRD20A2Q5SQ80 823 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ANKRD20A1Q5TYW2 823 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ANKRD20A3Q5VUR7 823 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 KDM7AQ6ZMT4 941 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 NANOGNBQ7Z5D8 188 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 DEFB132Q7Z7B7 95 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 TTC30AQ86WT1 665 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 MREGQ8N565 214 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 CCHCR1Q8TD31 782 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 EPS8L1Q8TE68 723 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 UBLCP1Q8WVY7 318 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 KIFAP3Q92845 792 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 SEMA4DQ92854 862 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ATG4CQ96DT6 458 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 IFT43Q96FT9 208 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 KREMEN1Q96MU8 473 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 ACCSQ96QU6 501 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 CAMKK2Q96RR4 588 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 PCDHB18PQ96TA0 734 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 SPOCK3Q9BQ16 436 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 PDCD2LQ9BRP1 358 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLDND1-208ENST00000503004 TCEAL9Q9UHQ7 104 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 GMEB1Q9Y692 573 aa5.49□□□□□ -1.53
CLDND1-208ENST00000503004 DENND3A2RUS2 1198 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 A6NNZ2 444 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 A8MUI8 341 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 DCDC2CA8MYV0 355 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CCDC188H7C350 402 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 SUPT3HO75486 399 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 MMEP08473 750 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 VIMP08670 466 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 DLATP10515 647 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 MYCLP1P12525 358 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 SP100P23497 879 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 STIP1P31948 543 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 HSPA9P38646 679 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 NPTX2P47972 431 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 GTF2BQ00403 316 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 POU5F1Q01860 360 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CETN1Q12798 172 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 BAATQ14032 418 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 MESDQ14696 234 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 KIF22Q14807 665 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TUBB8Q3ZCM7 444 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZNF394Q53GI3 561 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 C2CD6Q53TS8 623 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ARHGEF16Q5VV41 709 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 FKBP1CQ5VVH2 108 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 LMBRD2Q68DH5 695 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 RNF207Q6ZRF8 634 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CPLX4Q7Z7G2 160 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 MCF2L2Q86YR7 1114 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZDHHC14Q8IZN3 488 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 AGBL3Q8NEM8 1001 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TAS1R2Q8TE23 839 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 BSNDQ8WZ55 320 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CCT6BQ92526 530 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 C18orf8Q96DM3 657 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 NAF1Q96HR8 494 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 SEC16BQ96JE7 1060 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms