RNA–Protein interactions for RNA: ENST00000496152.1

NDUFAF3-206, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

TSL 2

Gene NDUFAF3, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-206ENST00000496152 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
NDUFAF3-206ENST00000496152 C8orf33Q9H7E9 229 aaPredicted RBP13.16□□□□□ -0.3
NDUFAF3-206ENST00000496152 TRPV4Q9HBA0 871 aa13.16□□□□□ -0.3
NDUFAF3-206ENST00000496152 C2orf42Q9NWW7 574 aa13.16□□□□□ -0.3
NDUFAF3-206ENST00000496152 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
NDUFAF3-206ENST00000496152 TMEM8BA6NDV4 472 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 TBX3O15119 743 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 ABLIM3O94929 683 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 IGFBP6P24592 240 aaPredicted RBP13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 HOXC13P31276 330 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 ELF1P32519 619 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 DDIT3P35638 169 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 CCR2P41597 374 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 RESTQ13127 1097 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 CAPSQ13938 189 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 PSAPL1Q6NUJ1 521 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 CD300LGQ6UXG3 332 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 Q6ZS52 159 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 HAS1Q92839 578 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 MTMR9Q96QG7 549 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 PCDHGA5Q9Y5G8 931 aa13.15□□□□□ -0.3
NDUFAF3-206ENST00000496152 IGF2RP11717 2491 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 VPS37CA5D8V6 355 aaPredicted RBP13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 SRRM3A6NNA2 597 aaPredicted RBP13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 MOSPD3O75425 235 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 PKP1Q13835 747 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 SLC8B1Q6J4K2 584 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 PDZD4Q76G19 769 aaPredicted RBP13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 BRAPQ7Z569 592 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 TCEAL8Q8IYN2 117 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 CSGALNACT1Q8TDX6 532 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 GAB3Q8WWW8 586 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 COL26A1Q96A83 441 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 LXNQ9BS40 222 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
NDUFAF3-206ENST00000496152 CCDC163A0A0D9SF12 145 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 MYBPHLA2RUH7 354 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 PRRG1O14668 218 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 B3GAT3O94766 335 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 ATF2P15336 505 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 GLRA2P23416 452 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 TKTP29401 623 aaKnown RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 NOVA1P51513 510 aaKnown RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 KPNA1P52294 538 aaPredicted RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 ROR1Q01973 937 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 KBTBD6Q86V97 674 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 SYNPOQ8N3V7 929 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 ZSCAN18Q8TBC5 510 aaPredicted RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 E2F7Q96AV8 911 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 ZDHHC9Q9Y397 364 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
NDUFAF3-206ENST00000496152 GIPC1O14908 333 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 CHADO15335 359 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 NEMFO60524 1076 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 RPP40O75818 363 aaKnown RBP13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 SLITRK3O94933 977 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 SEC24AO95486 1093 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 MCM7P33993 719 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 SOX9P48436 509 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 RING1Q06587 406 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 FOXC1Q12948 553 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 NBR1Q14596 966 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 TXNDC11Q6PKC3 985 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 YAF2Q8IY57 180 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 GATA6Q92908 595 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 ZNF512Q96ME7 567 aaPredicted RBP13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 GPR88Q9GZN0 384 aa13.12□□□□□ -0.31
NDUFAF3-206ENST00000496152 FZD8Q9H461 694 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms