RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KLK14Q9P0G3 267 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 ITGA11Q9UKX5 1188 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 COG5Q9UP83 839 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 HES2Q9Y543 173 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 NUB1Q9Y5A7 615 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 MYH11P35749 1972 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 SCN10AQ9Y5Y9 1956 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 SMIM28A0A1B0GU29 152 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 TTC26A0AVF1 554 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 GTPBP10A4D1E9 387 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 LRRC10BA6NIK2 292 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 LRRIQ3A6PVS8 624 aaPredicted RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 TBKBP1A7MCY6 615 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ABLIM1O14639 778 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 TRAPPC3O43617 180 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 MGEA5O60502 916 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ADCY5O95622 1261 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 EDN1P05305 212 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 CCDC172P0C7W6 258 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ATP1A3P13637 1013 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 HOXB3P14651 431 aaPredicted RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 KCNE1P15382 129 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 CYP3A5P20815 502 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 FMO5P49326 533 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ALDH7A1P49419 539 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 SCNN1GP51170 649 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 MFAP3P55082 362 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 TNNC1P63316 161 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 NCOA4Q13772 614 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 BMS1Q14692 1282 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 SLC10A6Q3KNW5 377 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 GLRA4Q5JXX5 417 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 UBXN11Q5T124 520 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 CRELD2Q6UXH1 353 aaPredicted RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 ZNF365Q70YC5 407 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 DGLUCYQ7Z3D6 616 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 LRRC43Q8N309 656 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 SMG8Q8ND04 991 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 HELQQ8TDG4 1101 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 TAF4BQ92750 862 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 LPPQ93052 612 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 SLC35C1Q96A29 364 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 NT5C1BQ96P26 610 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 SPAG5Q96R06 1193 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 MMS19Q96T76 1030 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 SLC9A7Q96T83 725 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 GAD1Q99259 594 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 PRRX2Q99811 253 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 XPO4Q9C0E2 1151 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 MTMR12Q9C0I1 747 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 HAPLN2Q9GZV7 340 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 TMEM117Q9H0C3 514 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 RTN4Q9NQC3 1192 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 INTS13Q9NVM9 706 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ZNHIT6Q9NWK9 470 aaKnown RBP7.49□□□□□ -1.21
UBR4-214ENST00000486515 RAB20Q9NX57 234 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 GCNT4Q9P109 453 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 CNTN3Q9P232 1028 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 DAAM1Q9Y4D1 1078 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 ZNF318Q5VUA4 2279 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 CHD9Q3L8U1 2897 aa7.49□□□□□ -1.21
UBR4-214ENST00000486515 A0A1B0GTH6 734 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 DCXO43602 365 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ZC3H11AO75152 810 aaKnown RBP eCLIP7.48□□□□□ -1.213e-14■■□□□ 13.2
UBR4-214ENST00000486515 KIF4AO95239 1232 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 POMCP01189 267 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ALDH2P05091 517 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ITGB3P05106 788 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ADRB2P07550 413 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 NFICP08651 508 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ATP2A2P16615 1042 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 RFX1P22670 979 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 TBXAS1P24557 533 aaPredicted RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 ATICP31939 592 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 RPL9P32969 192 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 PBX2P40425 430 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 OR1G1P47890 313 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 WDR5P61964 334 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 DLG4P78352 724 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 FAM189BP81408 668 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 TCF15Q12870 199 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 TUSC3Q13454 348 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 BTG3Q14201 252 aaPredicted RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 SYCP1Q15431 976 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ZNF699Q32M78 642 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 SV2CQ496J9 727 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ZNF667Q5HYK9 610 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ZBTB41Q5SVQ8 909 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 IER5LQ5T953 404 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 RIF1Q5UIP0 2472 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 LMBRD2Q68DH5 695 aaPredicted RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 SPECC1LQ69YQ0 1117 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 FAM117BQ6P1L5 589 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 DSTYKQ6XUX3 929 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 AGMOQ6ZNB7 445 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 SV2AQ7L0J3 742 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 ENOSF1Q7L5Y1 443 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 TRAPPC11Q7Z392 1133 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms