RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 TMX3Q96JJ7 454 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 TACO1Q9BSH4 297 aaKnown RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 TTLL2Q9BWV7 592 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 SEC61A2Q9H9S3 476 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 KCND1Q9NSA2 647 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 SAE1Q9UBE0 346 aaPredicted RBP5.43□□□□□ -1.54
VPS13A-211ENST00000484581 DNAI1Q9UI46 699 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 ZFP69BQ9UJL9 534 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 TESMINQ9Y4I5 508 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 HS3ST3A1Q9Y663 406 aa5.43□□□□□ -1.54
VPS13A-211ENST00000484581 A0A1W2PPC4 97 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 APOL1O14791 398 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 PRAMEF4O60810 478 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 KLHL18O94889 574 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 CENPBP07199 599 aaPredicted RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 SRGNP10124 158 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 KITP10721 976 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 EN2P19622 333 aaPredicted RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 MALP21145 153 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 GLRBP48167 497 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 ANTXR2P58335 489 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 FMO1Q01740 532 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 PUM3Q15397 648 aaKnown RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 CCDC38Q502W7 563 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 SPDYAQ5MJ70 313 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 PGBD2Q6P3X8 592 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 ABHD15Q6UXT9 468 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 GADL1Q6ZQY3 521 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 Q6ZVL8 140 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 SESTD1Q86VW0 696 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 SYTL1Q8IYJ3 562 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 GIMAP8Q8ND71 665 aaPredicted RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 Q8TCH9 128 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 RAB24Q969Q5 203 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 WDR92Q96MX6 357 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 WWC2-AS2Q96NR7 200 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 VRK1Q99986 396 aaPredicted RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 ZNF341Q9BYN7 854 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 BCO1Q9HAY6 547 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 SARS2Q9NP81 518 aaKnown RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 PIH1D1Q9NWS0 290 aaKnown RBP5.42□□□□□ -1.54
VPS13A-211ENST00000484581 GPR52Q9Y2T5 361 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 USP19O94966 1318 aa5.42□□□□□ -1.54
VPS13A-211ENST00000484581 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 CSTBP04080 98 aaKnown RBP5.41□□□□□ -1.54
VPS13A-211ENST00000484581 THP07101 528 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 GAAP10253 952 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 ADSLP30566 484 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-211ENST00000484581 SREBF1P36956 1147 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 WNT3AP56704 352 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 SNAPC2Q13487 334 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 MPEG1Q2M385 716 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 SLC35G1Q2M3R5 365 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 WDR72Q3MJ13 1102 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 DACT2Q5SW24 774 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 WDR78Q5VTH9 848 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 NME8Q8N427 588 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 ZNF527Q8NB42 609 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 PIK3C3Q8NEB9 887 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 OR7D4Q8NG98 312 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 NKD2Q969F2 451 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-211ENST00000484581 MRGPRX1Q96LB2 322 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 TBATAQ96M53 351 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 LMF1Q96S06 567 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 PDCD2LQ9BRP1 358 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 MEGF9Q9H1U4 602 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 LANCL2Q9NS86 450 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 Q9UFV3 132 aa5.41□□□□□ -1.54
VPS13A-211ENST00000484581 AFF4Q9UHB7 1163 aaKnown RBP5.41□□□□□ -1.54
VPS13A-211ENST00000484581 FBXO9Q9UK97 447 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-211ENST00000484581 MAGED2Q9UNF1 606 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-211ENST00000484581 NT5C1B-RDH14C9J2C7 533 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 F8W8V4 182 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 FFAR2O15552 330 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 GPR32O75388 356 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 SKAP2O75563 359 aaPredicted RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 CNOT4O95628 575 aaKnown RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 KNG1P01042 644 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 HARSP12081 509 aaKnown RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 BDNFP23560 247 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 HSPA7P48741 367 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 SUMO3P55854 103 aaPredicted RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 PER3P56645 1201 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 R3HDM1Q15032 1099 aaKnown RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 PRKD1Q15139 912 aaPredicted RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 UBE3CQ15386 1083 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 ZNF568Q3ZCX4 644 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 OTOP2Q7RTS6 562 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 SH2D3CQ8N5H7 860 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 STPG3Q8N7X2 389 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 FANCBQ8NB91 859 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 KBTBD7Q8WVZ9 684 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 NMD3Q96D46 503 aaKnown RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 LTV1Q96GA3 475 aaPredicted RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms