RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
VARS2-208ENST00000477052 ZFP37Q9Y6Q3 630 aaPredicted RBP12.73□□□□□ -0.37
VARS2-208ENST00000477052 KANSL1LA0AUZ9 987 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 FAM170BA6NMN3 283 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 SP9P0CG40 484 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 PTPN2P17706 415 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 RPL9P32969 192 aaKnown RBP12.72□□□□□ -0.37
VARS2-208ENST00000477052 SMTNP53814 917 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 STARD6P59095 220 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 MCL1Q07820 350 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 TWF1Q12792 350 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 MCM6Q14566 821 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 FAM78AQ5JUQ0 283 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 C1orf210Q8IVY1 113 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 MAML2Q8IZL2 1156 aaPredicted RBP12.72□□□□□ -0.37
VARS2-208ENST00000477052 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 ZHX3Q9H4I2 956 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 C17orf75Q9HAS0 396 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 CEP72Q9P209 647 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 KCNH3Q9ULD8 1083 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 CACNA1IQ9P0X4 2223 aa12.72□□□□□ -0.37
VARS2-208ENST00000477052 TISP43B9A030 160 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 H7C4K7 107 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 SYN3O14994 580 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 VNN2O95498 520 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 POU2F2P09086 479 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 MYL4P12829 197 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 CPB1P15086 417 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 ATF2P15336 505 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 PLCG1P19174 1290 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 FCARP24071 287 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 NCKAP1LP55160 1127 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 KARSQ15046 597 aaKnown RBP12.71□□□□□ -0.37
VARS2-208ENST00000477052 ENOX2Q16206 610 aaKnown RBP12.71□□□□□ -0.37
VARS2-208ENST00000477052 PRSS36Q5K4E3 855 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 ZPBP2Q6X784 338 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 TPRG1Q6ZUI0 275 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 TCEAL8Q8IYN2 117 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 MYCT1Q8N699 235 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 TIPINQ9BVW5 301 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 SPATA6Q9NWH7 488 aaPredicted RBP12.71□□□□□ -0.37
VARS2-208ENST00000477052 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 KIF3AQ9Y496 699 aa12.71□□□□□ -0.37
VARS2-208ENST00000477052 PDCD11Q14690 1871 aaKnown RBP12.71□□□□□ -0.37
VARS2-208ENST00000477052 GVINP1Q7Z2Y8 2422 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 NCANO14594 1321 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 TTC26A0AVF1 554 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 K7ENM7 598 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 MOSPD3O75425 235 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 SOAT2O75908 522 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 FAM13AO94988 1023 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 CLTAP09496 248 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 TARSP26639 723 aaKnown RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 NMT1P30419 496 aaKnown RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 VIPR2P41587 438 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 LIG4P49917 911 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 ZC2HC1CQ53FD0 456 aaPredicted RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 SLC39A4Q6P5W5 647 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 TSSK4Q6SA08 328 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 DCLK2Q8N568 766 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 SHDQ96IW2 340 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 DDX23Q9BUQ8 820 aaKnown RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 TBX20Q9UMR3 447 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
VARS2-208ENST00000477052 MIA3Q5JRA6 1907 aa12.7□□□□□ -0.38
VARS2-208ENST00000477052 SHISA7A6NL88 538 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 HNRNPDLO14979 420 aaKnown RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 SPTLC1O15269 473 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 FAM189A1O60320 539 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 ECI2O75521 394 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 LMNAP02545 664 aaKnown RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 UBA7P41226 1012 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 CSTF1Q05048 431 aaKnown RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 PPP2R3AQ06190 1150 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 TEAD2Q15562 447 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 ZBTB6Q15916 424 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 ARL6IP4Q66PJ3 421 aaKnown RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 JADE1Q6IE81 842 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 DSTYKQ6XUX3 929 aa12.69□□□□□ -0.38
VARS2-208ENST00000477052 PDZD4Q76G19 769 aaPredicted RBP12.69□□□□□ -0.38
VARS2-208ENST00000477052 APPL2Q8NEU8 664 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms