RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IGF2RP11717 2491 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 SMIM28A0A1B0GU29 152 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 HEPACAM2A8MVW5 462 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 TRAPPC3O43617 180 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 FOXD2O60548 495 aaPredicted RBP18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 ARPP19P56211 112 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 XKR4Q5GH76 650 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 NT5DC1Q5TFE4 455 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 IL31Q6EBC2 164 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 ALKAL1Q6UXT8 129 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 MCPH1Q8NEM0 835 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 C2orf40Q9H1Z8 148 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 FBXL5Q9UKA1 691 aa18.91■□□□□ 0.62
UBE2D4-209ENST00000454428 SLC38A8A6NNN8 435 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 HOXB3P14651 431 aaPredicted RBP18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 LIG1P18858 919 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 ATP2B1P20020 1258 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 HOXA6P31267 233 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 SCRN1Q12765 414 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 TWF1Q12792 350 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 COL9A2Q14055 689 aaPredicted RBP18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 TEAD2Q15562 447 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 CALCRLQ16602 461 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 TMEM132AQ24JP5 1023 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 DCAF4L1Q3SXM0 396 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 CYP4A22Q5TCH4 519 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 WDR5BQ86VZ2 330 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 CEP120Q8N960 986 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 SHKBP1Q8TBC3 707 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 ZMAT2Q96NC0 199 aaKnown RBP18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 LRRC3BQ96PB8 259 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 MTMR9Q96QG7 549 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 KIFC3Q9BVG8 833 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 LRRC3Q9BY71 257 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 ARRDC1-AS1Q9H2J1 176 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 EML5Q05BV3 1969 aa18.9■□□□□ 0.62
UBE2D4-209ENST00000454428 LAMA5O15230 3695 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 KIF26AQ9ULI4 1882 aaPredicted RBP18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 MYBPHLA2RUH7 354 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 AXIN1O15169 862 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 ZNF806P0C7X5 589 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 MYL4P12829 197 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 TXKP42681 527 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 FCHO2Q0JRZ9 810 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 LRRC32Q14392 662 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 TPGS2Q68CL5 300 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 CATSPER3Q86XQ3 398 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 STK36Q9NRP7 1315 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 AKAP13Q12802 2813 aa18.89■□□□□ 0.61
UBE2D4-209ENST00000454428 PODXLO00592 558 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 SYN3O14994 580 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 CHADO15335 359 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 MEFVO15553 781 aaPredicted RBP18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 MED24O75448 989 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 VNN2O95498 520 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 PROS1P07225 676 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 NAMPTP43490 491 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 RAP1GAPP47736 663 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 CCINQ13939 588 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 CEP68Q76N32 757 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 MSANTD3Q96H12 275 aa18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 ZNF512Q96ME7 567 aaPredicted RBP18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 C8orf33Q9H7E9 229 aaPredicted RBP18.88■□□□□ 0.61
UBE2D4-209ENST00000454428 SPECC1L-ADORA2AF8WAN1 911 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 EPN2O95208 641 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 CTDNEP1O95476 244 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 CTHP32929 405 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 DGKKQ5KSL6 1271 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 PLA2G2CQ5R387 149 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 STXBP5Q5T5C0 1151 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 STPG1Q5TH74 334 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 ATF7IP2Q5U623 682 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 RNF19BQ6ZMZ0 732 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 TMC8Q8IU68 726 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 CSGALNACT1Q8TDX6 532 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 MKNK1Q9BUB5 465 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 SMOC1Q9H4F8 434 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 POLD4Q9HCU8 107 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 ASAH2Q9NR71 780 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 AFF4Q9UHB7 1163 aaKnown RBP18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 CYP46A1Q9Y6A2 500 aa18.87■□□□□ 0.61
UBE2D4-209ENST00000454428 NUP210Q8TEM1 1887 aaPredicted RBP18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 DMXL2Q8TDJ6 3036 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 C1QTNF9BB2RNN3 333 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 H7C4K7 107 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 EXTL3O43909 919 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 NEMFO60524 1076 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 KCNK5O95279 499 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 C1QTNF9P0C862 333 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 CYP11B2P19099 503 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 CTXN3Q4LDR2 81 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 IQCEQ6IPM2 695 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 PKN3Q6P5Z2 889 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 C1orf228Q6PIY5 440 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 PADI6Q6TGC4 694 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 KBTBD6Q86V97 674 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms