RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 UHRF1Q96T88 793 aaPredicted RBP4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 PAGR1Q9BTK6 254 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 ENKD1Q9H0I2 346 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 SEMA6BQ9H3T3 888 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 CNNM1Q9NRU3 951 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 VPS45Q9NRW7 570 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 SPATA6Q9NWH7 488 aaPredicted RBP4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 LRFN1Q9P244 771 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 CROTQ9UKG9 612 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 SLC45A2Q9UMX9 530 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 RUVBL1Q9Y265 456 aaKnown RBP4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 CTDP1Q9Y5B0 961 aaPredicted RBP4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZMYM3Q14202 1370 aa4.98□□□□□ -1.61
HMGN3P1-201ENST00000453847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 hCG_1984214I3L0E3 225 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 PYCARD-AS1I3L0S3 204 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 TNFRSF6BO95407 300 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 CHGBP05060 677 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 MYL4P12829 197 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 POLD1P28340 1107 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 PTPN7P35236 360 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 DDIT3P35638 169 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 RXRGP48443 463 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 CDR1P51861 262 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 SESN2P58004 480 aaPredicted RBP4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 MPP1Q00013 466 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 SLC13A2Q13183 592 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 G3BP1Q13283 466 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 PRKG1Q13976 671 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 KIF22Q14807 665 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 CCDC93Q567U6 631 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 HYIQ5T013 277 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 FKBP15Q5T1M5 1219 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZNF783Q6ZMS7 281 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 USP49Q70CQ1 688 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 BEND5Q7L4P6 421 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 MOGAT3Q86VF5 341 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 IRF2BP1Q8IU81 584 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 TMTC1Q8IUR5 882 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 IGDCC3Q8IVU1 814 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 TP53INP2Q8IXH6 220 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 ADGRG2Q8IZP9 1017 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 TMEM151AQ8N4L1 468 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 KYQ8NBH2 561 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 NUDT10Q8NFP7 164 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 MDM1Q8TC05 714 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 CFHR4Q92496 578 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 RILPL2Q969X0 211 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 CLIC6Q96NY7 704 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZNF518BQ9C0D4 1074 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 TM7SF3Q9NS93 570 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 TMEM140Q9NV12 185 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 IFT80Q9P2H3 777 aaPredicted RBP4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 RGS17Q9UGC6 210 aaPredicted RBP4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 SRRDQ9UH36 339 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 ZDHHC8Q9ULC8 765 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 VWA7Q9Y334 891 aa4.97□□□□□ -1.61
HMGN3P1-201ENST00000453847 A0A087WWL8 130 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 MYOCOSA0A1B0GUC4 107 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 MSTNO14793 375 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 HNRNPDLO14979 420 aaKnown RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 DAPK3O43293 454 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 TBC1D4O60343 1298 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 SNX2O60749 519 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLC43A1O75387 559 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 A1BGP04217 495 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 POLBP06746 335 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 TXNP10599 105 aaKnown RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 IL13P35225 146 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 TUBP50607 506 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 PNLIPRP1P54315 467 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 NOMO3P69849 1222 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 SRSF3P84103 164 aaKnown RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 SP140Q13342 867 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 PCOLCEQ15113 449 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF827Q17R98 1081 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 PABPC1LQ4VXU2 614 aaKnown RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 ARHGAP15Q53QZ3 475 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 AFMIDQ63HM1 303 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 OTUD7BQ6GQQ9 843 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 TANGO2Q6ICL3 276 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 RETSATQ6NUM9 610 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZDHHC24Q6UX98 284 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 RFX8Q6ZV50 586 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 MAATS1Q7Z4T9 603 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 CPOQ8IVL8 374 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 FANCBQ8NB91 859 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 NAXEQ8NCW5 288 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 AGBL5Q8NDL9 886 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 FAM71BQ8TC56 605 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 GFM2Q969S9 779 aaKnown RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 C11orf54Q9H0W9 315 aaPredicted RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 KCNK12Q9HB15 430 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLAMF7Q9NQ25 335 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 SERHLQ9NQF3 203 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms