RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 Q9Y3F1 56 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 RALGAPA2Q2PPJ7 1873 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 ERLIN2O94905 339 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 CXCL8P10145 99 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 ARF4P18085 180 aaPredicted RBP20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 NSFP46459 744 aaKnown RBP20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 PTPROQ16827 1216 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 ZNF699Q32M78 642 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 APBB1IPQ7Z5R6 666 aaPredicted RBP20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 IFT20Q8IY31 132 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 CEP120Q8N960 986 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 SCLT1Q96NL6 688 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 VIPAS39Q9H9C1 493 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 ZFYVE28Q9HCC9 887 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 CITO14578 2027 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 TSPAN1O60635 241 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 OSTNP61366 133 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 MESDQ14696 234 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 CASP8Q14790 479 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 PCBP1Q15365 356 aaKnown RBP eCLIP20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 PPP2R5EQ16537 467 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 CDR2LQ86X02 465 aaPredicted RBP20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 HDAC7Q8WUI4 952 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 KRT12Q99456 494 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 ZSWIM1Q9BR11 485 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 ADPGKQ9BRR6 497 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 UBXN6Q9BZV1 441 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 XYLT2Q9H1B5 865 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 ACBD3Q9H3P7 528 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 FLRT1Q9NZU1 646 aa20.15■□□□□ 0.82
SEMA3D-202ENST00000444867 A0A1B0GUA9 196 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 CCDC66A2RUB6 948 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 ATMINO43313 823 aaPredicted RBP20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 THAP12O43422 761 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 CTNNA2P26232 953 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 CPT1AP50416 773 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 RNASE9P60153 205 aaKnown RBP20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 NOMO3P69849 1222 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 GPS2Q13227 327 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 LIN9Q5TKA1 542 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 TLK2Q86UE8 772 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 NT5DC4Q86YG4 428 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 PHF13Q86YI8 300 aaPredicted RBP20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 CD101Q93033 1021 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 APBA2Q99767 749 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 SLITRK6Q9H5Y7 841 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 GDF3Q9NR23 364 aa20.14■□□□□ 0.81
SEMA3D-202ENST00000444867 SMIM35A0A1B0GVV1 85 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 LACTBL1A8MY62 500 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 KRIT1O00522 736 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 SMIM10L2AP0DMW4 78 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 SMIM10L2BP0DMW5 78 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 HSPA6P17066 643 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 COMTP21964 271 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 ATICP31939 592 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 SREBF2Q12772 1141 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 DCAF4L1Q3SXM0 396 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 PRAMEF19Q5SWL8 479 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 NAA35Q5VZE5 725 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 MON1BQ7L1V2 547 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 CD302Q8IX05 232 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 AENQ8WTP8 325 aaKnown RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 CYFIP2Q96F07 1278 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 CPB2Q96IY4 423 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 RNPC3Q96LT9 517 aaKnown RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 CISHQ9NSE2 258 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 SETD4Q9NVD3 440 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 PASKQ96RG2 1323 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 A0A0U1RQG5 324 aaPredicted RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 MBLAC1A4D2B0 266 aaPredicted RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 TMEM110-MUSTN1A8MSY1 372 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 ZMYND10O75800 440 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 LSM8O95777 96 aaKnown RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 CALCAP01258 141 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 IGHA2P01877 340 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 SLC7A5Q01650 507 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 C1QBPQ07021 282 aaKnown RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 DCAF12L1Q5VU92 463 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 TMEM192Q8IY95 271 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 EIF1ADQ8N9N8 165 aaKnown RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 ZNF606Q8WXB4 792 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 CPA5Q8WXQ8 436 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 KAT2BQ92831 832 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 PPP1R16BQ96T49 567 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 AP5M1Q9H0R1 490 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 ADAMTS10Q9H324 1103 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 VRTNQ9H8Y1 702 aa20.13■□□□□ 0.81
SEMA3D-202ENST00000444867 MROH7Q68CQ1 1323 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 HAS3O00219 553 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 HEXIM1O94992 359 aaKnown RBP20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 CTNNA1P35221 906 aaKnown RBP20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 ASPAP45381 313 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 EPHB4P54760 987 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 MFSD10Q14728 455 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 ZNF667Q5HYK9 610 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 EMBQ6PCB8 327 aa20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 FAM124BQ9H5Z6 455 aaPredicted RBP20.12■□□□□ 0.81
SEMA3D-202ENST00000444867 MRPL47Q9HD33 250 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms