RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HOMER3Q9NSC5 361 aa14.96□□□□□ -0.02
SMARCA4-204ENST00000444061 SNED1Q8TER0 1413 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 EBAG9O00559 213 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 ZBED1O96006 694 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 CYBBP04839 570 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 KRT7P08729 469 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 DNAJB2P25686 324 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 PCBP1Q15365 356 aaKnown RBP eCLIP14.95□□□□□ -0.023e-16■■■□□ 16
SMARCA4-204ENST00000444061 CCL14Q16627 93 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 MAP4K3Q8IVH8 894 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 TSC1Q92574 1164 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 SEMA6BQ9H3T3 888 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 SNX1Q13596 522 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 KCNA2P16389 499 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 ATP5DP30049 168 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 CRYBB1P53674 252 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 TTI2Q6NXR4 508 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 CTU1Q7Z7A3 348 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 EFCAB13Q8IY85 973 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 ADGRF2Q8IZF7 708 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 GAD1Q99259 594 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 DPP7Q9UHL4 492 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 MAD1L1Q9Y6D9 718 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 RTN2O75298 545 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 CCNE2O96020 404 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 SPON2Q9BUD6 331 aa14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 IPO11Q9UI26 975 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-204ENST00000444061 MOXD2PA6NHM9 499 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 AKAP3O75969 853 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 GOLGA7BQ2TAP0 167 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 CCDC68Q9H2F9 335 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ITGA11Q9UKX5 1188 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 PTPN22Q9Y2R2 807 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 NUP188Q5SRE5 1749 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 COL1A2P08123 1366 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ATICP31939 592 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 COG7P83436 770 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ARID5BQ14865 1188 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 NFE2Q16621 373 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 UGCGQ16739 394 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 GPAT2Q6NUI2 795 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 DNAAF3Q8N9W5 541 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 LENG1Q96BZ8 264 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 POP1Q99575 1024 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 DHX35Q9H5Z1 703 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 RECQL4O94761 1208 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 LYPLA2O95372 231 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 LHX1P48742 406 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ARHGAP15Q53QZ3 475 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ANO5Q75V66 913 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 HDXQ7Z353 690 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 USP38Q8NB14 1042 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 ZBTB45Q96K62 511 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 SMIM35A0A1B0GVV1 85 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 A6NNZ2 444 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 TJP3O95049 919 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 CD52P31358 61 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 TUBB8Q3ZCM7 444 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 CYP4A22Q5TCH4 519 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 BRSK2Q8IWQ3 736 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 KIAA0895Q8NCT3 520 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 RNF14Q9UBS8 474 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 MORF4L1Q9UBU8 362 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 MSRAQ9UJ68 235 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 CDC23Q9UJX2 597 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 NAGPAQ9UK23 515 aa14.94□□□□□ -0.02
SMARCA4-204ENST00000444061 C4AP0C0L4 1744 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 A0A087X0B3 334 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 CARNS1A5YM72 827 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 PDGFRAP16234 1089 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 CXCR5P32302 372 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 MYL6P60660 151 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 SV2AQ7L0J3 742 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 SLC30A5Q8TAD4 765 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 UBA3Q8TBC4 463 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 RFFLQ8WZ73 363 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 INTS13Q9NVM9 706 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 BCAR1P56945 870 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 RPL10AP62906 217 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 CAPSQ13938 189 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 TDRD10Q5VZ19 366 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 MMS22LQ6ZRQ5 1243 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 SIAH1Q8IUQ4 282 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 NDUFAF2Q8N183 169 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 ARFGAP2Q8N6H7 521 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 TAS1R2Q8TE23 839 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 RNF186Q9NXI6 227 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 VAV3Q9UKW4 847 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 KIAA1257Q9ULG3 409 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 ST3GAL5Q9UNP4 418 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 AP1G2O75843 785 aa14.93□□□□□ -0.02
SMARCA4-204ENST00000444061 CROCCP2Q86T23 111 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms