RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 HBP1O60381 514 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 MSCO60682 206 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 PPFIA2O75334 1257 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 PPFIA4O75335 1185 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 ECEL1O95672 775 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 TNNC2P02585 160 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 RARAP10276 462 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 TXNP10599 105 aaKnown RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 NR1D1P20393 614 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 FLT3P36888 993 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 SLC26A2P50443 739 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 DRG2P55039 364 aaKnown RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 NOMO3P69849 1222 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 IFFO1Q0D2I5 559 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 TTLL4Q14679 1199 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 UAP1Q16222 522 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 AGBL2Q5U5Z8 902 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 MPZL3Q6UWV2 235 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 MON1BQ7L1V2 547 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 TRIM50Q86XT4 487 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 PHF13Q86YI8 300 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 RHPN2Q8IUC4 686 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 PASD1Q8IV76 773 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 C12orf50Q8NA57 414 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 GTF3C2Q8WUA4 911 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 ANKRD36BP1Q96IX9 119 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 VCPIP1Q96JH7 1222 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 FHDC1Q9C0D6 1143 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-218ENST00000439806 TXNRD2Q9NNW7 524 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 ADAM22Q9P0K1 906 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 ATP8A1Q9Y2Q0 1164 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 IGKV6-21A0A0C4DH24 114 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 INO80B-WBP1J3KQ70 363 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 FSCN2O14926 492 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 EIF3HO15372 352 aaKnown RBP eCLIP11.11□□□□□ -0.638e-7■■□□□ 13.6
CPNE1-218ENST00000439806 ASAP2O43150 1006 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 PSTPIP1O43586 416 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 PROSCO94903 275 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-218ENST00000439806 MAN1A1P33908 653 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 EPHX2P34913 555 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 CETN2P41208 172 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 SSR1P43307 286 aaKnown RBP11.11□□□□□ -0.63
CPNE1-218ENST00000439806 ATP1A2P50993 1020 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 IRAK1P51617 712 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 PLTPP55058 493 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
CPNE1-218ENST00000439806 MYL6P60660 151 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
CPNE1-218ENST00000439806 MCL1Q07820 350 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 ZNF844Q08AG5 666 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 PPP1R7Q15435 360 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 DUOXA2Q1HG44 320 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 Q3C1V9 767 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 ZNF568Q3ZCX4 644 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 ATF7IP2Q5U623 682 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 MMS22LQ6ZRQ5 1243 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 HOOK3Q86VS8 718 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 CCDC50Q8IVM0 306 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 RHOT1Q8IXI2 618 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 COPS5Q92905 334 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 NLRP4Q96MN2 994 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 FAM129AQ9BZQ8 928 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 INO80BQ9C086 356 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-218ENST00000439806 MTMR12Q9C0I1 747 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
CPNE1-218ENST00000439806 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.635e-7■■■□□ 17.8
CPNE1-218ENST00000439806 CPSF3Q9UKF6 684 aaKnown RBP11.11□□□□□ -0.63
CPNE1-218ENST00000439806 TCRBV7S2A1N4TA0A589 114 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 H0YGN5 161 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 IL18RAPO95256 599 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 ASS1P00966 412 aaKnown RBP11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CALB1P05937 261 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CD58P19256 250 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 GJC1P36383 396 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 RPL21P46778 160 aaKnown RBP11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CDR1P51861 262 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 PMS2P54278 862 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CCNA1P78396 465 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
CPNE1-218ENST00000439806 PTP4A2Q12974 167 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 CALCOCO2Q13137 446 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-218ENST00000439806 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 MOGSQ13724 837 aa11.1□□□□□ -0.63
CPNE1-218ENST00000439806 SIX1Q15475 284 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms