RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 XRCC6P12956 609 aaKnown RBP eCLIP11.31□□□□□ -0.6
HOXD3-203ENST00000432796 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
HOXD3-203ENST00000432796 PPP2R5AQ15172 486 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 PSMD5Q16401 504 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 WDR44Q5JSH3 913 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 FAM78AQ5JUQ0 283 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 VITQ6UXI7 678 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 SMG8Q8ND04 991 aaKnown RBP11.31□□□□□ -0.6
HOXD3-203ENST00000432796 LNX1Q8TBB1 728 aaPredicted RBP11.31□□□□□ -0.6
HOXD3-203ENST00000432796 DEPDC1BQ8WUY9 529 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 ASB16Q96NS5 453 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 NACC1Q96RE7 527 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 TTPALQ9BTX7 342 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 TMEM9BQ9NQ34 198 aa11.31□□□□□ -0.6
HOXD3-203ENST00000432796 DAXXQ9UER7 740 aaPredicted RBP11.31□□□□□ -0.6
HOXD3-203ENST00000432796 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 COL4A2P08572 1712 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 SDK1Q7Z5N4 2213 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 FAM221BA6H8Z2 402 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 LRRIQ4A6NIV6 560 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 H3BQV1 296 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 ARNTLO00327 626 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 ZNF263O14978 683 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 STBD1O95210 358 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 SEC24BO95487 1268 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 CAVIN2O95810 425 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 PXNP49023 591 aaPredicted RBP11.3□□□□□ -0.6
HOXD3-203ENST00000432796 MCM2P49736 904 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 PLK5Q496M5 336 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 EARS2Q5JPH6 523 aaKnown RBP11.3□□□□□ -0.6
HOXD3-203ENST00000432796 NOSTRINQ8IVI9 506 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 SYNPOQ8N3V7 929 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 DEFB124Q8NES8 71 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 TNFRSF25Q93038 417 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 IFT74Q96LB3 600 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 CEP89Q96ST8 783 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 ADPGKQ9BRR6 497 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
HOXD3-203ENST00000432796 C8orf33Q9H7E9 229 aaPredicted RBP11.3□□□□□ -0.6
HOXD3-203ENST00000432796 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 IPPQ9Y573 584 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 ADAMTS20P59510 1910 aa11.3□□□□□ -0.6
HOXD3-203ENST00000432796 KALRNO60229 2985 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 MTCL1Q9Y4B5 1905 aaKnown RBP11.29□□□□□ -0.6
HOXD3-203ENST00000432796 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
HOXD3-203ENST00000432796 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
HOXD3-203ENST00000432796 CDX4O14627 284 aaPredicted RBP11.29□□□□□ -0.6
HOXD3-203ENST00000432796 ADAM12O43184 909 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 EXTL3O43909 919 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 TADA2AO75478 443 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 SLITRK3O94933 977 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 MUTP22033 750 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 RARRES1P49788 294 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 PTENP60484 403 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 CREB5Q02930 508 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 C19orf57Q0VDD7 668 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 CCINQ13939 588 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 RAB33AQ14088 237 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 ZNF174Q15697 407 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 ELF2Q15723 593 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 DEPTORQ8TB45 409 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 CSGALNACT1Q8TDX6 532 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 SMARCD2Q92925 531 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 SLC32A1Q9H598 525 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
HOXD3-203ENST00000432796 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
HOXD3-203ENST00000432796 WDR27A2RRH5 827 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 MYBPHLA2RUH7 354 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 SLC38A8A6NNN8 435 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 H0Y626 953 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 LAD1O00515 517 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 MICAL2O94851 1124 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 TRIM16O95361 564 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 PTPN2P17706 415 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 CCT6AP40227 531 aaKnown RBP11.28□□□□□ -0.6
HOXD3-203ENST00000432796 KPNA1P52294 538 aaPredicted RBP11.28□□□□□ -0.6
HOXD3-203ENST00000432796 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
HOXD3-203ENST00000432796 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 TXNDC11Q6PKC3 985 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 CEP57Q86XR8 500 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 RABGGTAQ92696 567 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 PRIMPOLQ96LW4 560 aa11.28□□□□□ -0.6
HOXD3-203ENST00000432796 MTMR9Q96QG7 549 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms