RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 PTPN2P17706 415 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 LONP1P36776 959 aaKnown RBP13.09□□□□□ -0.31
TTC3-208ENST00000428693 GUCY2FP51841 1108 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 NCKAP1LP55160 1127 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 ADCY1Q08828 1119 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 CCDC105Q8IYK2 499 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 DDX12PQ92771 950 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 SUSD3Q96L08 255 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 FOXQ1Q9C009 403 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 TBX20Q9UMR3 447 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 LACTBL1A8MY62 500 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 XPOTO43592 962 aaKnown RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 SEC24AO95486 1093 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 MYL4P12829 197 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 ATF2P15336 505 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 PDCP20941 246 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 TWF1Q12792 350 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 KYAT1Q16773 422 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 SLC5A9Q2M3M2 681 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 CYP4A22Q5TCH4 519 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 PDZD4Q76G19 769 aaPredicted RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 DYMQ7RTS9 669 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 SHDQ96IW2 340 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 EPSTI1Q96J88 318 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 ZNF512Q96ME7 567 aaPredicted RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 PGLYRP2Q96PD5 576 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 PLEKHA5Q9HAU0 1116 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
TTC3-208ENST00000428693 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
TTC3-208ENST00000428693 MYH15Q9Y2K3 1946 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 DMDP11532 3685 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 OGTO15294 1046 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 SLC26A4O43511 780 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 ABLIM3O94929 683 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 PAPLNO95428 1278 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 OR4Q2P0C623 313 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 CEBPBP17676 345 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 TXLNAP40222 546 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 CDR1P51861 262 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
TTC3-208ENST00000428693 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 FAM173BQ6P4H8 233 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 RNF19BQ6ZMZ0 732 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 ASCL5Q7RTU5 278 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 LRRC15Q8TF66 581 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 NOC3LQ8WTT2 800 aaKnown RBP13.07□□□□□ -0.32
TTC3-208ENST00000428693 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 SLITRK6Q9H5Y7 841 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 BLOC1S4Q9NUP1 217 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 TBC1D7Q9P0N9 293 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 INSL5Q9Y5Q6 135 aa13.07□□□□□ -0.32
TTC3-208ENST00000428693 TTC26A0AVF1 554 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 ARHGEF37A1IGU5 675 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 ZNF197O14709 1029 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 LRRN2O75325 713 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 CD72P21854 359 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 DDIT3P35638 169 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 ACOT2P49753 483 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 PFKPQ01813 784 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 MRPL58Q14197 206 aaKnown RBP13.06□□□□□ -0.32
TTC3-208ENST00000428693 GRM2Q14416 872 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 MLF2Q15773 248 aaPredicted RBP13.06□□□□□ -0.32
TTC3-208ENST00000428693 ENOX2Q16206 610 aaKnown RBP13.06□□□□□ -0.32
TTC3-208ENST00000428693 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 TPGS2Q68CL5 300 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 JADE1Q6IE81 842 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 HS6ST3Q8IZP7 471 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 PANK2Q9BZ23 570 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 GDE1Q9NZC3 331 aa13.06□□□□□ -0.32
TTC3-208ENST00000428693 AFF4Q9UHB7 1163 aaKnown RBP13.06□□□□□ -0.32
TTC3-208ENST00000428693 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
TTC3-208ENST00000428693 TISP43B9A030 160 aa13.05□□□□□ -0.32
TTC3-208ENST00000428693 PPEF2O14830 753 aa13.05□□□□□ -0.32
TTC3-208ENST00000428693 TBC1D4O60343 1298 aa13.05□□□□□ -0.32
TTC3-208ENST00000428693 POU2F2P09086 479 aa13.05□□□□□ -0.32
TTC3-208ENST00000428693 GJA1P17302 382 aa13.05□□□□□ -0.32
TTC3-208ENST00000428693 NBL1P41271 181 aa13.05□□□□□ -0.32
TTC3-208ENST00000428693 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms