RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 RAB17Q9H0T7 212 aa16.82■□□□□ 0.28
TVP23C-203ENST00000428082 FAM153AQ9UHL3 310 aa16.82■□□□□ 0.28
TVP23C-203ENST00000428082 RSPH14Q9UHP6 348 aa16.82■□□□□ 0.28
TVP23C-203ENST00000428082 USP20Q9Y2K6 914 aa16.82■□□□□ 0.28
TVP23C-203ENST00000428082 LRRIQ4A6NIV6 560 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 MIF4GDA9UHW6 222 aaKnown RBP16.81■□□□□ 0.28
TVP23C-203ENST00000428082 VTNP04004 478 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 TRIM49P0CI25 452 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 TRIM49CP0CI26 452 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 SRGAP2CP0DJJ0 459 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 CYP2C9P11712 490 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 TMOD1P28289 359 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 NAMPTP43490 491 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 GNGT1P63211 74 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 MXD4Q14582 209 aaPredicted RBP16.81■□□□□ 0.28
TVP23C-203ENST00000428082 TTMPQ5BVD1 217 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 HVCN1Q96D96 273 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 IKZF4Q9H2S9 585 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 PHF24Q9UPV7 400 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 AKT3Q9Y243 479 aa16.81■□□□□ 0.28
TVP23C-203ENST00000428082 UTP11Q9Y3A2 253 aaKnown RBP16.81■□□□□ 0.28
TVP23C-203ENST00000428082 MYO1CO00159 1063 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 DNM1LO00429 736 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 GNAT1P11488 350 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 GTF2BQ00403 316 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 SPDYCQ5MJ68 293 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 SESTD1Q86VW0 696 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 FAM49AQ9H0Q0 323 aaPredicted RBP16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ARHGAP28Q9P2N2 729 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 SIP14410 1827 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 SMIM35A0A1B0GVV1 85 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 DENND3A2RUS2 1198 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
TVP23C-203ENST00000428082 BUB1BO60566 1050 aaPredicted RBP16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ERLIN2O94905 339 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 SGPL1O95470 568 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ARHGAP44Q17R89 818 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 LMO3Q8TAP4 145 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ARL8AQ96BM9 186 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ATP6V1G3Q96LB4 118 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 NLRP4Q96MN2 994 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 RASSF4Q9H2L5 321 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 STARD7Q9NQZ5 370 aa16.8■□□□□ 0.28
TVP23C-203ENST00000428082 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
TVP23C-203ENST00000428082 EBAG9O00559 213 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 PHLDB3Q6NSJ2 640 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 USP37Q86T82 979 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 SPATS2Q86XZ4 545 aaKnown RBP16.79■□□□□ 0.28
TVP23C-203ENST00000428082 UBL4BQ8N7F7 174 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 OLIG1Q8TAK6 271 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 DEPTORQ8TB45 409 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 SEC14L1Q92503 715 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 AP1M1Q9BXS5 423 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 UBE2TQ9NPD8 197 aaPredicted RBP16.79■□□□□ 0.28
TVP23C-203ENST00000428082 SEPT11Q9NVA2 429 aaKnown RBP16.79■□□□□ 0.28
TVP23C-203ENST00000428082 KCNG1Q9UIX4 513 aa16.79■□□□□ 0.28
TVP23C-203ENST00000428082 FAM187AA6NFU0 413 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 TULP1O00294 542 aaPredicted RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 ASAP2O43150 1006 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 GBP1P32455 592 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 TMEM62Q0P6H9 643 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 BIRC3Q13489 604 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 EPC2Q52LR7 807 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 GOLPH3Q9H4A6 298 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 TBX20Q9UMR3 447 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 PLAAQ9Y263 795 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 FOXN3O00409 490 aaPredicted RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 DDX3YO15523 660 aaKnown RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 KRT14P02533 472 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 ABCB4P21439 1286 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 NLRP11P59045 1033 aaKnown RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 GPC5P78333 572 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 ENPEPQ07075 957 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 SLC20A2Q08357 652 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 DHX34Q14147 1143 aaKnown RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 TFDP1Q14186 410 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 RDH13Q8NBN7 331 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 MCOLN1Q9GZU1 580 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 DDX47Q9H0S4 455 aaKnown RBP16.78■□□□□ 0.28
TVP23C-203ENST00000428082 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 OSGEPQ9NPF4 335 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 RASAL2Q9UJF2 1139 aa16.78■□□□□ 0.28
TVP23C-203ENST00000428082 A0A087WZ62 844 aa16.77■□□□□ 0.28
TVP23C-203ENST00000428082 H0YCG3 227 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms