RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 LXNQ9BS40 222 aa10.54□□□□□ -0.72
LINC00963-202ENST00000419300 PARVBQ9HBI1 364 aa10.54□□□□□ -0.72
LINC00963-202ENST00000419300 SLC4A7Q9Y6M7 1214 aa10.54□□□□□ -0.72
LINC00963-202ENST00000419300 CRB1P82279 1406 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 PTPRUQ92729 1446 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 AKAP10O43572 662 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SRP72O76094 671 aaKnown RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SNRPAP09012 282 aaKnown RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 DAB2P98082 770 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 KCTD2Q14681 263 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 PPP6R3Q5H9R7 873 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SH2D3CQ8N5H7 860 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 PNKPQ96T60 521 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SLC13A1Q9BZW2 595 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 TMBIM4Q9HC24 238 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 ETAA1Q9NY74 926 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 STMN3Q9NZ72 180 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 AGLP35573 1532 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 EMSYQ7Z589 1322 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 USP31Q70CQ4 1352 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 MS4A14Q96JA4 679 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 PCIF1Q9H4Z3 704 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 ENOPH1Q9UHY7 261 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 POTECB2RU33 542 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CD58P19256 250 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CATSPER3Q86XQ3 398 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 MYLK4Q86YV6 388 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 VPS11Q9H270 941 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 FAM153AQ9UHL3 310 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 HEY1Q9Y5J3 304 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 KIF28PB7ZC32 967 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SUPT3HO75486 399 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SFSWAPQ12872 951 aaKnown RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 MTF1Q14872 753 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 ARHGAP22Q7Z5H3 698 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CNKSR1Q969H4 720 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 TRIM54Q9BYV2 358 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 GTF2H1P32780 548 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 ANKRD40Q6AI12 368 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CYB5R4Q7L1T6 521 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CCNJLQ8IV13 435 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 ASAP3Q8TDY4 903 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CENPTQ96BT3 561 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SCN3BQ9NY72 215 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 POLBP06746 335 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 EIF3EP60228 445 aaKnown RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 NCAPG2Q86XI2 1143 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 THTPAQ9BU02 230 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CCDC90BQ9GZT6 254 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 CNOT7Q9UIV1 285 aaKnown RBP10.53□□□□□ -0.72
LINC00963-202ENST00000419300 EYA4O95677 639 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 TMEM253P0C7T8 217 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 LONRF1Q17RB8 773 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 IFT43Q96FT9 208 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 GRID1Q9ULK0 1009 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 C15orf41Q9Y2V0 281 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SLIT3O75094 1523 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 ROBO2Q9HCK4 1378 aa10.53□□□□□ -0.72
LINC00963-202ENST00000419300 SNTNA6NMZ2 147 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 ATP6V1G2O95670 118 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 FAM9CQ8IZT9 166 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 POP5Q969H6 163 aaKnown RBP10.52□□□□□ -0.72
LINC00963-202ENST00000419300 RBBP8Q99708 897 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 RGL1Q9NZL6 768 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 PLAGL2Q9UPG8 496 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 CLPTM1O96005 669 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 EIF2S1P05198 315 aaKnown RBP10.52□□□□□ -0.72
LINC00963-202ENST00000419300 FDX1P10109 184 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 GCLMP48507 274 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 RWDD4Q6NW29 188 aaKnown RBP10.52□□□□□ -0.72
LINC00963-202ENST00000419300 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 TUBGCP3Q96CW5 907 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 CD209Q9NNX6 404 aa10.52□□□□□ -0.72
LINC00963-202ENST00000419300 H7C1W4 665 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 IL18RAPO95256 599 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 STAT3P40763 770 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 STX5Q13190 355 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 KRT72Q14CN4 511 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 NT5DC1Q5TFE4 455 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 CCNYL1Q8N7R7 359 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 ZMYND8Q9ULU4 1186 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-202ENST00000419300 LMTK3Q96Q04 1460 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 ZNF184Q99676 751 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-202ENST00000419300 DDX20Q9UHI6 824 aaKnown RBP10.52□□□□□ -0.73
LINC00963-202ENST00000419300 MAD2L2Q9UI95 211 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 TTC7AQ9ULT0 858 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-202ENST00000419300 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00963-202ENST00000419300 DMC1Q14565 340 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
LINC00963-202ENST00000419300 DDIASQ8IXT1 998 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms