RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CIPCQ9C0C6 399 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 PCMTD2Q9NV79 361 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 EEF2KO00418 725 aaKnown RBP19.38■□□□□ 0.69
SHANK3-202ENST00000414786 PPP6R2O75170 966 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 ADRA2BP18089 450 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 SLC39A14Q15043 492 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 NFRKBQ6P4R8 1299 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 SARM1Q6SZW1 724 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 ZFYVE9O95405 1425 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 ARF5P84085 180 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 NLRP10Q86W26 655 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 RGL4Q8IZJ4 473 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 HPS3Q969F9 1004 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■■■□ 24.7
SHANK3-202ENST00000414786 SOX13Q9UN79 622 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 A8MX80 341 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 ASAP2O43150 1006 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 ALDH9A1P49189 494 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 THTPAQ9BU02 230 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 MYO1CO00159 1063 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 ZBTB5O15062 677 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 GNASQ5JWF2 1037 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 THAP9Q9H5L6 903 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 FBXO40Q9UH90 709 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 LAMC3Q9Y6N6 1575 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 TMC4Q7Z404 712 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 C2orf40Q9H1Z8 148 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 KRT84Q9NSB2 600 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 TDRKHQ9Y2W6 561 aaKnown RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 ITGB6P18564 788 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 ZMYM1Q5SVZ6 1142 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 HEATR4Q86WZ0 1026 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 CLIP3Q96DZ5 547 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 OSBPL1AQ9BXW6 950 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 CNOT10Q9H9A5 744 aaKnown RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 TOMM70O94826 608 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 CPSF4O95639 269 aaKnown RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 QARSP47897 775 aaKnown RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 KLHL38Q2WGJ6 581 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 CDKL3Q8IVW4 592 aaPredicted RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 C3orf70A6NLC5 250 aaPredicted RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 GTF2E2P29084 291 aaKnown RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 AP3B2Q13367 1082 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 NPHS2Q9NP85 383 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 ZC3H11AO75152 810 aaKnown RBP eCLIP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 SH3BGRLO75368 114 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 IZUMO3Q5VZ72 239 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 OLFML2BQ68BL8 750 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 PPP1R2P3Q6NXS1 205 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 DCAF4Q8WV16 495 aa19.37■□□□□ 0.69
SHANK3-202ENST00000414786 DDX47Q9H0S4 455 aaKnown RBP19.37■□□□□ 0.69
SHANK3-202ENST00000414786 SYNCRIPO60506 623 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 RHOBTB1O94844 696 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 CAPRIN2Q6IMN6 1127 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 FHOD1Q9Y613 1164 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ATP10DQ9P241 1426 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 APBA1Q02410 837 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 TRIM71Q2Q1W2 868 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ZNF438Q7Z4V0 828 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 FRMD6Q96NE9 622 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ABCB1P08183 1280 aaPredicted RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 NCAM1P13591 858 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 MCEEQ96PE7 176 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ASS1P00966 412 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ATP1A3P13637 1013 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 CCNE1P24864 410 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 GPD1LQ8N335 351 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 BLOC1S5Q8TDH9 187 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ACTR5Q9H9F9 607 aaPredicted RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 VTI1BQ9UEU0 232 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 MBL2P11226 248 aaPredicted RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 LAMC2Q13753 1193 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 DUOXA2Q1HG44 320 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 EIF2AK1Q9BQI3 630 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 KLHL25Q9H0H3 589 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 CHORDC1Q9UHD1 332 aaPredicted RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 AFF2P51816 1311 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 SYCP2Q9BX26 1530 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 XPO1O14980 1071 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 UNKQ9C0B0 810 aaKnown RBP19.36■□□□□ 0.69
SHANK3-202ENST00000414786 SLC9A8Q9Y2E8 581 aa19.36■□□□□ 0.69
SHANK3-202ENST00000414786 A0A087WUV0 522 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 S100A5P33763 92 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 STAT5BP51692 787 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 KRT39Q6A163 491 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 NSUN7Q8NE18 718 aaKnown RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 HDAC6Q9UBN7 1215 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 CNOT7Q9UIV1 285 aaKnown RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 NPTXRO95502 500 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 MYL4P12829 197 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 YWHABP31946 246 aaKnown RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 CCDC92Q53HC0 331 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-202ENST00000414786 WNK4Q96J92 1243 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 TNIP3Q96KP6 325 aa19.35■□□□□ 0.69
SHANK3-202ENST00000414786 ZNF304Q9HCX3 659 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms