RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ADRB2P07550 413 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 GARTP22102 1010 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 ELF1P32519 619 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 CASP5P51878 434 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
RFFL-204ENST00000414419 RAB33AQ14088 237 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 PPM1LQ5SGD2 360 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
RFFL-204ENST00000414419 SPATA1Q5VX52 437 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 DSTYKQ6XUX3 929 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 LEO1Q8WVC0 666 aaPredicted RBP12.16□□□□□ -0.46
RFFL-204ENST00000414419 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 FAM213AQ9BRX8 229 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 PRKD2Q9BZL6 878 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 FBXW11Q9UKB1 542 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 ZDHHC9Q9Y397 364 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 SCN1AP35498 2009 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 FAM86C2PA6NEL3 165 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 ADAM12O43184 909 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 XYLBO75191 536 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 C8AP07357 584 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 HNRNPA1P09651 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
RFFL-204ENST00000414419 PAX3P23760 479 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 CMA1P23946 247 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 ADSSP30520 456 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 ARPP19P56211 112 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 CTXN3Q4LDR2 81 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 FAM26FQ5R3K3 315 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 ZNF280DQ6N043 979 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 CNNM4Q6P4Q7 775 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 USP37Q86T82 979 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 HPS3Q969F9 1004 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 LRFN3Q9BTN0 628 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 RHOBTB2Q9BYZ6 727 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 BLZF1Q9H2G9 400 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 IKZF4Q9H2S9 585 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 WDR6Q9NNW5 1121 aaKnown RBP12.15□□□□□ -0.46
RFFL-204ENST00000414419 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 SERTAD1Q9UHV2 236 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 C2CD2Q9Y426 696 aa12.15□□□□□ -0.46
RFFL-204ENST00000414419 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 ARHGEF37A1IGU5 675 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 PRRG1O14668 218 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 KIAA0391O15091 583 aaKnown RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 EIF3DO15371 548 aaKnown RBP eCLIP12.14□□□□□ -0.47
RFFL-204ENST00000414419 NFICP08651 508 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 SLFN14P0C7P3 912 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 PFKFB1P16118 471 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 GBP2P32456 591 aaPredicted RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 GUCY2FP51841 1108 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 NUCB2P80303 420 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 C9orf57Q5W0N0 161 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 CRELD2Q6UXH1 353 aaPredicted RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 RSPO2Q6UXX9 243 aaPredicted RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 ZDHHC14Q8IZN3 488 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 ZNF461Q8TAF7 563 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 EDAQ92838 391 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 PCIF1Q9H4Z3 704 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 DPP3Q9NY33 737 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 RBAKQ9NYW8 714 aaPredicted RBP12.14□□□□□ -0.47
RFFL-204ENST00000414419 LIMD1Q9UGP4 676 aa12.14□□□□□ -0.47
RFFL-204ENST00000414419 CLUHO75153 1309 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 GOLGA8IPA6NC78 632 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 GOLGA8JA6NMD2 632 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 M0QZQ0 153 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 CCL16O15467 120 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 EXTL3O43909 919 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 ODC1P11926 461 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 CPB1P15086 417 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 COL9A1P20849 921 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 CASP1P29466 404 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 HOXA9P31269 272 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 SYKP43405 635 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 LILRA4P59901 499 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 ZXDAP98168 799 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 ROR1Q01973 937 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 CUL4BQ13620 913 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
RFFL-204ENST00000414419 PTPN21Q16825 1174 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 SLC8B1Q6J4K2 584 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 BRSK2Q8IWQ3 736 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 GPD1LQ8N335 351 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 FEZF2Q8TBJ5 459 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms