RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ARNTLO00327 626 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 XRCC6P12956 609 aaKnown RBP eCLIP18.33■□□□□ 0.52
CHMP3-203ENST00000409225 LIMK1P53667 647 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 SHC2P98077 582 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 TWF1Q12792 350 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 NR5A1Q13285 461 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 TEAD2Q15562 447 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 WDR44Q5JSH3 913 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 TTC8Q8TAM2 541 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 RSPRY1Q96DX4 576 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 KIFC3Q9BVG8 833 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 TRPV4Q9HBA0 871 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 ASAH2Q9NR71 780 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 CEP72Q9P209 647 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 FBXL5Q9UKA1 691 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 CYP46A1Q9Y6A2 500 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 BAHCC1Q9P281 2608 aa18.33■□□□□ 0.52
CHMP3-203ENST00000409225 SMIM28A0A1B0GU29 152 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 PODXLO00592 558 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 CDKL5O76039 1030 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 COL9A2Q14055 689 aaPredicted RBP18.32■□□□□ 0.52
CHMP3-203ENST00000409225 CTXN3Q4LDR2 81 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 ATF7IP2Q5U623 682 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 TPGS2Q68CL5 300 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 WDR5BQ86VZ2 330 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 MSANTD3Q96H12 275 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 C8orf33Q9H7E9 229 aaPredicted RBP18.32■□□□□ 0.52
CHMP3-203ENST00000409225 RXFP3Q9NSD7 469 aa18.32■□□□□ 0.52
CHMP3-203ENST00000409225 TRIP11Q15643 1979 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 PDCD11Q14690 1871 aaKnown RBP18.31■□□□□ 0.52
CHMP3-203ENST00000409225 TM4SF5O14894 197 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 SYN3O14994 580 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 SPATA31C1P0DKV0 1188 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 NAMPTP43490 491 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 MLLT6P55198 1093 aaPredicted RBP18.31■□□□□ 0.52
CHMP3-203ENST00000409225 SCRN1Q12765 414 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 DGKKQ5KSL6 1271 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 NT5DC1Q5TFE4 455 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 TXNDC11Q6PKC3 985 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 GPIHBP1Q8IV16 184 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 SHKBP1Q8TBC3 707 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 FAM200AQ8TCP9 573 aa18.31■□□□□ 0.52
CHMP3-203ENST00000409225 STK36Q9NRP7 1315 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 GREB1Q4ZG55 1949 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 SPECC1L-ADORA2AF8WAN1 911 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 CHADO15335 359 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 NEMFO60524 1076 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 KRT2P35908 639 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 YARSP54577 528 aaKnown RBP18.3■□□□□ 0.52
CHMP3-203ENST00000409225 OSTNP61366 133 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 MRPL58Q14197 206 aaKnown RBP18.3■□□□□ 0.52
CHMP3-203ENST00000409225 PON2Q15165 354 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 STPG1Q5TH74 334 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 C1orf228Q6PIY5 440 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 PADI6Q6TGC4 694 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 CATSPER3Q86XQ3 398 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 CEP120Q8N960 986 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 LEMD2Q8NC56 503 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 E2F7Q96AV8 911 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 POLD4Q9HCU8 107 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
CHMP3-203ENST00000409225 AFF4Q9UHB7 1163 aaKnown RBP18.3■□□□□ 0.52
CHMP3-203ENST00000409225 NUB1Q9Y5A7 615 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 SDK1Q7Z5N4 2213 aa18.3■□□□□ 0.52
CHMP3-203ENST00000409225 FAM208BQ5VWN6 2430 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 WNT7AO00755 349 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 MED24O75448 989 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 PROS1P07225 676 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 ZNF806P0C7X5 589 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 CTHP32929 405 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 PXNP49023 591 aaPredicted RBP18.29■□□□□ 0.52
CHMP3-203ENST00000409225 EPHA5P54756 1037 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 ZNF280DQ6N043 979 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 APBB1IPQ7Z5R6 666 aaPredicted RBP18.29■□□□□ 0.52
CHMP3-203ENST00000409225 TNFRSF25Q93038 417 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 NACC1Q96RE7 527 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 GPR88Q9GZN0 384 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 SMOC1Q9H4F8 434 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 BRMS1Q9HCU9 246 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 TOPORSQ9NS56 1045 aaPredicted RBP18.29■□□□□ 0.52
CHMP3-203ENST00000409225 SLC38A7Q9NVC3 462 aa18.29■□□□□ 0.52
CHMP3-203ENST00000409225 ATRXP46100 2492 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 A0A1W2PRU2 124 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 MYBPHLA2RUH7 354 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 ARHGEF35A5YM69 484 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 REC8O95072 547 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 EPN2O95208 641 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 KCNK5O95279 499 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 CPB1P15086 417 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 CYP11B2P19099 503 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 FCHO2Q0JRZ9 810 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 PPP2R5AQ15172 486 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 ALKAL1Q6UXT8 129 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 RNF19BQ6ZMZ0 732 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 CACNA2D4Q7Z3S7 1137 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 KBTBD6Q86V97 674 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 RALGPS2Q86X27 583 aaPredicted RBP18.28■□□□□ 0.52
CHMP3-203ENST00000409225 ZFYVE19Q96K21 471 aa18.28■□□□□ 0.52
CHMP3-203ENST00000409225 ZMAT2Q96NC0 199 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms