RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 OR5B17Q8NGF7 314 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 VCPIP1Q96JH7 1222 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 TMEM109Q9BVC6 243 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 CHST7Q9NS84 486 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 NUB1Q9Y5A7 615 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 UMODL1Q5DID0 1318 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 TLDC2A0PJX2 215 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 RGS16O15492 202 aaPredicted RBP17.93■□□□□ 0.46
NUP50-203ENST00000407019 THAP12O43422 761 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 PSTPIP1O43586 416 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 EDNRBP24530 442 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 STAT5BP51692 787 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 NCOA4Q13772 614 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 C6orf118Q5T5N4 469 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
NUP50-203ENST00000407019 GRK7Q8WTQ7 553 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 RAPGEF5Q92565 580 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 DCLK3Q9C098 648 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 AZI2Q9H6S1 392 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 BTBD7Q9P203 1132 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 ASIC3Q9UHC3 531 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 GGA2Q9UJY4 613 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 SNCAIPQ9Y6H5 919 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 SCINQ9Y6U3 715 aa17.93■□□□□ 0.46
NUP50-203ENST00000407019 SMIM23A6NLE4 172 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 PEX10O60683 326 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 USP2O75604 605 aaPredicted RBP17.92■□□□□ 0.46
NUP50-203ENST00000407019 PTK6Q13882 451 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 NEDD9Q14511 834 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 UBAP2Q5T6F2 1119 aaKnown RBP17.92■□□□□ 0.46
NUP50-203ENST00000407019 ZPBP2Q6X784 338 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.46
NUP50-203ENST00000407019 RHOT1Q8IXI2 618 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 ATG4AQ8WYN0 398 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 IMPG2Q9BZV3 1241 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 CD2APQ9Y5K6 639 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 MEFVO15553 781 aaPredicted RBP17.92■□□□□ 0.46
NUP50-203ENST00000407019 MAFO75444 373 aaPredicted RBP17.92■□□□□ 0.46
NUP50-203ENST00000407019 GAS8O95995 478 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 CPP00450 1065 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 AGTP01019 485 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 ITIH2P19823 946 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 AP3M2P53677 418 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 C1QBPQ07021 282 aaKnown RBP17.92■□□□□ 0.46
NUP50-203ENST00000407019 MAMLD1Q13495 774 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 VGLL4Q14135 290 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 SEZ6Q53EL9 994 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 PLEKHA7Q6IQ23 1121 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 MMS22LQ6ZRQ5 1243 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 TRMT10CQ7L0Y3 403 aaKnown RBP17.92■□□□□ 0.46
NUP50-203ENST00000407019 CCDC25Q86WR0 208 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 CCDC50Q8IVM0 306 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 BRSK2Q8IWQ3 736 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 SNF8Q96H20 258 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 HERPUD2Q9BSE4 406 aa17.92■□□□□ 0.46
NUP50-203ENST00000407019 A0A0G2JMZ2 1700 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 SOWAHBA6NEL2 793 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 SSTR3P32745 418 aaPredicted RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 HIRAP54198 1017 aaPredicted RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 OTUD6BQ8N6M0 293 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 UHMK1Q8TAS1 419 aaKnown RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 CENPTQ96BT3 561 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 STMN4Q9H169 189 aaPredicted RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 HOMER3Q9NSC5 361 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 RALAP11233 206 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 TCF7P36402 384 aaPredicted RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 LIG3P49916 1009 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 EFNA5P52803 228 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 DAB2IPQ5VWQ8 1189 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 RHBDF2Q6PJF5 856 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 YTHDF3Q7Z739 585 aaKnown RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 NCAPG2Q86XI2 1143 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 WDR49Q8IV35 697 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 KATNAL2Q8IYT4 538 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 MICALL1Q8N3F8 863 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 EPS8L3Q8TE67 593 aaKnown RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 SEPT1Q8WYJ6 367 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 FAM167AQ96KS9 214 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 CCDC114Q96M63 670 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 SELENOSQ9BQE4 189 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 MRPL4Q9BYD3 311 aaKnown RBP17.91■□□□□ 0.46
NUP50-203ENST00000407019 PPME1Q9Y570 386 aa17.91■□□□□ 0.46
NUP50-203ENST00000407019 MMP13P45452 471 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 ZNF132P52740 706 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 TAS2R40P59535 323 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 GRM1Q13255 1194 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 KLF1Q13351 362 aaPredicted RBP17.9■□□□□ 0.46
NUP50-203ENST00000407019 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
NUP50-203ENST00000407019 DRP2Q13474 957 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 TTC31Q49AM3 519 aaPredicted RBP17.9■□□□□ 0.46
NUP50-203ENST00000407019 METTL7BQ6UX53 244 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 ARMC9Q7Z3E5 817 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 UBR7Q8N806 425 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 ATL2Q8NHH9 583 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 MDM1Q8TC05 714 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 PRPF31Q8WWY3 499 aaKnown RBP17.9■□□□□ 0.46
NUP50-203ENST00000407019 XPO6Q96QU8 1125 aaKnown RBP17.9■□□□□ 0.46
NUP50-203ENST00000407019 SPATC1LQ9H0A9 340 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 PARVAQ9NVD7 372 aa17.9■□□□□ 0.46
NUP50-203ENST00000407019 C5orf60A6NFR6 353 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms