RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TNFSF9P41273 254 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 STAT6P42226 847 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 BRCC3P46736 316 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 LIG4P49917 911 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 CLCNKBP51801 687 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 GUCY2FP51841 1108 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 NOLC1Q14978 699 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 SLC10A6Q3KNW5 377 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 USP41Q3LFD5 358 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 XKR4Q5GH76 650 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 CES5AQ6NT32 575 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 SLC39A4Q6P5W5 647 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 CD300LGQ6UXG3 332 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ALKAL1Q6UXT8 129 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 SFR1Q86XK3 245 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 LINC00301Q8NCQ3 95 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 STAMQ92783 540 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZNF396Q96N95 335 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ACAP3Q96P50 834 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 POP1Q99575 1024 aaKnown RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 FGFBP2Q9BYJ0 223 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ADAM7Q9H2U9 754 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 RXFP1Q9HBX9 757 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TOPORSQ9NS56 1045 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 DZANK1Q9NVP4 752 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TBC1D7Q9P0N9 293 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 STK17AQ9UEE5 414 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TUBGCP4Q9UGJ1 667 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 DACH1Q9UI36 760 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TBX20Q9UMR3 447 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 PDCD11Q14690 1871 aaKnown RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TTC24A2A3L6 582 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 LACTBL1A8MY62 500 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 C2CD4DB7Z1M9 353 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 PODXLO00592 558 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 HNRNPDLO14979 420 aaKnown RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 AXIN1O15169 862 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 TGM5O43548 720 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 RFPL2O75678 378 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 B3GAT3O94766 335 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 GLUD1P00367 558 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 IDEP14735 1019 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 KCNE1P15382 129 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 JUNDP17535 347 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 TKTP29401 623 aaKnown RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 GTF2BQ00403 316 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 DNM1Q05193 864 aaKnown RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 ITIH3Q06033 890 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 MCL1Q07820 350 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 KCNA1Q09470 495 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 PSMD5Q16401 504 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 UPP1Q16831 310 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMEM31Q5JXX7 168 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 DCLRE1AQ6PJP8 1040 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 SHC4Q6S5L8 630 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 RSPO2Q6UXX9 243 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 CCDC73Q6ZRK6 1079 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 RETREG3Q86VR2 466 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 PPFIBP1Q86W92 1011 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 MAP4K3Q8IVH8 894 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 SNIP1Q8TAD8 396 aaKnown RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 LNX1Q8TBB1 728 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 PIK3R5Q8WYR1 880 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 DHX58Q96C10 678 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 DNAJC19Q96DA6 116 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 MRGPRX2Q96LB1 330 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 LRFN3Q9BTN0 628 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 TTPALQ9BTX7 342 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 C1QTNF1Q9BXJ1 281 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 SFXN1Q9H9B4 322 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 CNTN3Q9P232 1028 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 STK39Q9UEW8 545 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 SSX2IPQ9Y2D8 614 aa6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 MORC2Q9Y6X9 1032 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 MTCL1Q9Y4B5 1905 aaKnown RBP6.29□□□□□ -1.4
HMGB1P20-201ENST00000402555 DENND4AQ7Z401 1863 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZNF318Q5VUA4 2279 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CACNA1HO95180 2353 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 A0A0B4J269 797 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CCDC195A0A1B0GUA6 201 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 TTC26A0AVF1 554 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 H0YCG3 227 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMEM189-UBE2V1I3L0A0 370 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PPEF2O14830 753 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 OGTO15294 1046 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 FAM189A1O60320 539 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PPP6R2O75170 966 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 YEATS4O95619 227 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 PIGRP01833 764 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ASGR2P07307 311 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CLTAP09496 248 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 ALADP13716 330 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 FGFR3P22607 806 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 CASP1P29466 404 aa6.28□□□□□ -1.4
HMGB1P20-201ENST00000402555 MTHFRP42898 656 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms