RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 BAP1Q92560 729 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 KCNQ5Q9NR82 932 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 A8MXQ7 604 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 RARGP13631 454 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 ARL13BQ3SXY8 428 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 SEZ6Q53EL9 994 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 METTL23Q86XA0 190 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 F5H423 210 aaPredicted RBP18.65■□□□□ 0.58
SNED1-204ENST00000401884 AARSP49588 968 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNED1-204ENST00000401884 AMPD2Q01433 879 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 DSTYKQ6XUX3 929 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 LRRC71Q8N4P6 559 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 RAPGEF5Q92565 580 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 KCNMB3Q9NPA1 279 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 CCT8L1PA6NM43 557 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 KITP10721 976 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 RBP3P10745 1247 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 ANGEL2Q5VTE6 544 aaKnown RBP18.65■□□□□ 0.58
SNED1-204ENST00000401884 FAM193BQ96PV7 902 aaPredicted RBP18.65■□□□□ 0.58
SNED1-204ENST00000401884 NIF3L1Q9GZT8 377 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 VPS11Q9H270 941 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 RAB6BQ9NRW1 208 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 APRTP07741 180 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 PTENP60484 403 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 SH2D4BQ5SQS7 431 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 NUDCD3Q8IVD9 361 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 TSEN2Q8NCE0 465 aaKnown RBP18.65■□□□□ 0.58
SNED1-204ENST00000401884 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
SNED1-204ENST00000401884 DHX38Q92620 1227 aaKnown RBP18.65■□□□□ 0.58
SNED1-204ENST00000401884 PDCD2LQ9BRP1 358 aa18.65■□□□□ 0.58
SNED1-204ENST00000401884 HNRNPH3P31942 346 aaKnown RBP18.64■□□□□ 0.58
SNED1-204ENST00000401884 CUL2Q13617 745 aa18.64■□□□□ 0.58
SNED1-204ENST00000401884 CDR2LQ86X02 465 aaPredicted RBP18.64■□□□□ 0.58
SNED1-204ENST00000401884 EPS8L3Q8TE67 593 aaKnown RBP18.64■□□□□ 0.58
SNED1-204ENST00000401884 CENPCQ03188 943 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 SMTNL2Q2TAL5 461 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 C4orf19Q8IY42 314 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 PRDM4Q9UKN5 801 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 MEIS2O14770 477 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 CREB3O43889 395 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 THOC5Q13769 683 aaKnown RBP18.64■□□□□ 0.57
SNED1-204ENST00000401884 TWF2Q6IBS0 349 aaKnown RBP18.64■□□□□ 0.57
SNED1-204ENST00000401884 NT5DC3Q86UY8 548 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 CERS5Q8N5B7 392 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 KCNV2Q8TDN2 545 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 MMP19Q99542 508 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 MID2Q9UJV3 735 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 RGS7P49802 495 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 SEMA4AQ9H3S1 761 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 Q9H521 79 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 IPO11Q9UI26 975 aaKnown RBP18.64■□□□□ 0.57
SNED1-204ENST00000401884 APOBEC2Q9Y235 224 aaKnown RBP18.64■□□□□ 0.57
SNED1-204ENST00000401884 FIS1Q9Y3D6 152 aa18.64■□□□□ 0.57
SNED1-204ENST00000401884 SPECC1L-ADORA2AF8WAN1 911 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 RFC5P40937 340 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
SNED1-204ENST00000401884 DACT2Q5SW24 774 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 KCNV1Q6PIU1 500 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 C3orf62Q6ZUJ4 267 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 LRRC34Q8IZ02 419 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 HIPK4Q8NE63 616 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 STOML1Q9UBI4 398 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 SNX9Q9Y5X1 595 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 MYBL2P10244 700 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 DPEP1P16444 411 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 ZNF662Q6ZS27 426 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 MKL1Q969V6 931 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 HDAC11Q96DB2 347 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 ACAP3Q96P50 834 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 STAP1Q9ULZ2 295 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 HSPA4LO95757 839 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 BRD2P25440 801 aaKnown RBP18.63■□□□□ 0.57
SNED1-204ENST00000401884 ADORA2BP29275 332 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 C1orf131Q8NDD1 294 aaKnown RBP18.63■□□□□ 0.57
SNED1-204ENST00000401884 TMC2Q8TDI7 906 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 SERPINB12Q96P63 405 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 KIF1AQ12756 1690 aa18.63■□□□□ 0.57
SNED1-204ENST00000401884 KCNN4O15554 427 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 MAP3K7O43318 606 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 OATP04181 439 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 GARTP22102 1010 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 GMPSP49915 693 aaPredicted RBP18.62■□□□□ 0.57
SNED1-204ENST00000401884 CBWD6Q4V339 395 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 CBWD3Q5JTY5 395 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 CBWD5Q5RIA9 395 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 GRAP2O75791 330 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 SEPT6Q14141 434 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 RWDD4Q6NW29 188 aaKnown RBP18.62■□□□□ 0.57
SNED1-204ENST00000401884 ACSF2Q96CM8 615 aaPredicted RBP18.62■□□□□ 0.57
SNED1-204ENST00000401884 KLF6Q99612 283 aaPredicted RBP18.62■□□□□ 0.57
SNED1-204ENST00000401884 PSMC3IPQ9P2W1 217 aaPredicted RBP18.62■□□□□ 0.57
SNED1-204ENST00000401884 SCOCQ9UIL1 159 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 USH1CQ9Y6N9 552 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 CFLARO15519 480 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 SMIM24O75264 130 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 ZKSCAN4Q969J2 545 aaPredicted RBP18.62■□□□□ 0.57
SNED1-204ENST00000401884 FAM129AQ9BZQ8 928 aa18.62■□□□□ 0.57
SNED1-204ENST00000401884 DNAJC5Q9H3Z4 198 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms