RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 DDX42Q86XP3 938 aaKnown RBP eCLIP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 TTC39CQ8N584 583 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 FAM84AQ96KN4 292 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 TRIM51Q9BSJ1 452 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ABHD16BQ9H3Z7 469 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 RGS17Q9UGC6 210 aaPredicted RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 TTC7AQ9ULT0 858 aaPredicted RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CXCL8P10145 99 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 SDC4P31431 198 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ARL4AP40617 200 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 SLC1A1P43005 524 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 MARSP56192 900 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ORC1Q13415 861 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 HSDL1Q3SXM5 330 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF677Q86XU0 584 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CCNYQ8ND76 341 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 C12orf42Q96LP6 360 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CELF4Q9BZC1 486 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 PPFIA4O75335 1185 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 STAG3L1P0CL83 205 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 CCDC14Q49A88 953 aa14.9□□□□□ -0.02
SCAF4-202ENST00000399804 C1orf131Q8NDD1 294 aaKnown RBP14.9□□□□□ -0.02
SCAF4-202ENST00000399804 PAPPAQ13219 1627 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 GLTPD2A6NH11 291 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 RRM1P23921 792 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 KCNJ1P48048 391 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 ZBTB16Q05516 673 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 ADCY1Q08828 1119 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 ZPBP2Q6X784 338 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 B4GALNT4Q76KP1 1039 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 CCDC13Q8IYE1 715 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 P3H4Q92791 437 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 CABS1Q96KC9 395 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 KATNAL1Q9BW62 490 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 CARD9Q9H257 536 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 VTA1Q9NP79 307 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 ZNF131P52739 623 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 FAM49BQ9NUQ9 324 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 FAM187AA6NFU0 413 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 KRT7P08729 469 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 YWHAGP61981 247 aaKnown RBP eCLIP14.89□□□□□ -0.03
SCAF4-202ENST00000399804 HHATQ5VTY9 493 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 EXOC4Q96A65 974 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 PDGFCQ9NRA1 345 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 KLK14Q9P0G3 267 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 HEY1Q9Y5J3 304 aa14.89□□□□□ -0.03
SCAF4-202ENST00000399804 FRMD3A2A2Y4 597 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 ACKR2O00590 384 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 PJA2O43164 708 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 PHBP35232 272 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 PRKCIP41743 596 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 IFNAR2P48551 515 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 ARPP19P56211 112 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 MEI1Q5TIA1 1274 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 PDZD4Q76G19 769 aaPredicted RBP14.88□□□□□ -0.03
SCAF4-202ENST00000399804 TBK1Q9UHD2 729 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 RASGRF2O14827 1237 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 STX2P32856 288 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 RGS2P41220 211 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 HIRAP54198 1017 aaPredicted RBP14.88□□□□□ -0.03
SCAF4-202ENST00000399804 ITIH3Q06033 890 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 PSMD6Q15008 389 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 NOTUMQ6P988 496 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 UBA3Q8TBC4 463 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 RIN2Q8WYP3 895 aaPredicted RBP14.88□□□□□ -0.03
SCAF4-202ENST00000399804 ZNF560Q96MR9 790 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 LTBP3Q9NS15 1303 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
SCAF4-202ENST00000399804 LGALS2P05162 132 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 FGFR4P22455 802 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 CPT1AP50416 773 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 SARNPP82979 210 aaKnown RBP14.88□□□□□ -0.03
SCAF4-202ENST00000399804 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 IRF2BP2Q7Z5L9 587 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 OSMRQ99650 979 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 NT5C1AQ9BXI3 368 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 CISHQ9NSE2 258 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 FBXL5Q9UKA1 691 aa14.88□□□□□ -0.03
SCAF4-202ENST00000399804 GRAP2O75791 330 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 NCKAP1LP55160 1127 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 DHX34Q14147 1143 aaKnown RBP14.87□□□□□ -0.03
SCAF4-202ENST00000399804 CYP4A22Q5TCH4 519 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 WDR49Q8IV35 697 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCAF4-202ENST00000399804 PPP1R13LQ8WUF5 828 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 FAM118BQ9BPY3 351 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 TLR2O60603 784 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 NR1D1P20393 614 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 ACVR2BQ13705 512 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 CAPSQ13938 189 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 TFDP2Q14188 446 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 PLCB4Q15147 1175 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 GRIK4Q16099 956 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 LGSNQ5TDP6 509 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 EPM2AIP1Q7L775 607 aaPredicted RBP14.87□□□□□ -0.03
SCAF4-202ENST00000399804 NOP9Q86U38 636 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms