RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ELMO2Q96JJ3 720 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 VCPKMTQ9H867 229 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 RAVER2Q9HCJ3 691 aaKnown RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 LRRIQ3A6PVS8 624 aaPredicted RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 UTYO14607 1347 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 SNRPAP09012 282 aaKnown RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 NFKBIAP25963 317 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 SUSD4Q5VX71 490 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 FOXP4Q8IVH2 680 aaPredicted RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 TLR2O60603 784 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 SERPINB9P50453 376 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 NUDT2P50583 147 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 COPAP53621 1224 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 P3H2Q8IVL5 708 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 THEM5Q8N1Q8 247 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 BEST2Q8NFU1 509 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 BTN2A2Q8WVV5 523 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 CASKIN2Q8WXE0 1202 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 ARHGEF26Q96DR7 871 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 DCP1AQ9NPI6 582 aaPredicted RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 AGO2Q9UKV8 859 aaKnown RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 PHTF1Q9UMS5 762 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 RNF219Q5W0B1 726 aaPredicted RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 USP49Q70CQ1 688 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 GPR141Q7Z602 305 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 ABHD8Q96I13 439 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 AGBL1Q96MI9 1066 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 ALDH8A1Q9H2A2 487 aaPredicted RBP16.9■□□□□ 0.3
ITSN1-209ENST00000399352 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
ITSN1-209ENST00000399352 PRPF4O43172 522 aaKnown RBP eCLIP16.89■□□□□ 0.292e-6■■■□□ 15.5
ITSN1-209ENST00000399352 STRNO43815 780 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 ALBP02768 609 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 PHKA2P46019 1235 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 KRT76Q01546 638 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 ORC2Q13416 577 aaPredicted RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 CCDC60Q8IWA6 550 aaPredicted RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 ZNF556Q9HAH1 456 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■□□ 18
ITSN1-209ENST00000399352 CHORDC1Q9UHD1 332 aaPredicted RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 A0A1B0GW55 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 BBOX1O75936 387 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4L2P0CJ85 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4L3P0CJ86 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4L4P0CJ87 422 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4L5P0CJ88 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4L6P0CJ89 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4L7P0CJ90 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 SLC9A1P19634 815 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 MCEEQ96PE7 176 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 SENP7Q9BQF6 1050 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 GEMIN8Q9NWZ8 242 aaKnown RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 DUX4Q9UBX2 424 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 TUBE1Q9UJT0 475 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 SEMA3FQ13275 785 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 EPS8L3Q8TE67 593 aaKnown RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 SH3KBP1Q96B97 665 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 TUBGCP3Q96CW5 907 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 RNPEPQ9H4A4 650 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 RGL1Q9NZL6 768 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 MROH9Q5TGP6 573 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 PRUNE1Q86TP1 453 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 USP33Q8TEY7 942 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 WNK4Q96J92 1243 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 USE1Q9NZ43 259 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 HERC5Q9UII4 1024 aaKnown RBP16.89■□□□□ 0.29
ITSN1-209ENST00000399352 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
ITSN1-209ENST00000399352 NLRP11P59045 1033 aaKnown RBP16.88■□□□□ 0.29
ITSN1-209ENST00000399352 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 PTPRN2Q92932 1015 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 C18orf8Q96DM3 657 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 GPBP1L1Q9HC44 474 aaPredicted RBP16.88■□□□□ 0.29
ITSN1-209ENST00000399352 TWF2Q6IBS0 349 aaKnown RBP16.88■□□□□ 0.29
ITSN1-209ENST00000399352 NLRP9Q7RTR0 991 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 ADGRF4Q8IZF3 695 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 PAPOLBQ9NRJ5 636 aaKnown RBP16.88■□□□□ 0.29
ITSN1-209ENST00000399352 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
ITSN1-209ENST00000399352 POLIQ9UNA4 740 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 ALG6Q9Y672 507 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 MAFGO15525 162 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 IYDQ6PHW0 289 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 SIKE1Q9BRV8 207 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.88■□□□□ 0.29
ITSN1-209ENST00000399352 ARHGEF38Q9NXL2 777 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 ZNF197O14709 1029 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 FMO5P49326 533 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 FAM111AQ96PZ2 611 aa16.88■□□□□ 0.29
ITSN1-209ENST00000399352 ARHGAP31Q2M1Z3 1444 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms