RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 MOGAT1Q96PD6 335 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 USP28Q96RU2 1077 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 NAPGQ99747 312 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 COQ7Q99807 217 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SDF4Q9BRK5 362 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 FAM167BQ9BTA0 163 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 MENTQ9BUN1 341 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 RHOBTB2Q9BYZ6 727 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SHCBP1LQ9BZQ2 653 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SRCIN1Q9C0H9 1055 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 C6orf62Q9GZU0 229 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TRPV6Q9H1D0 765 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 GBA3Q9H227 469 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TPK1Q9H3S4 243 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DNAJC18Q9H819 358 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ANKZF1Q9H8Y5 726 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SPC25Q9HBM1 224 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 METTL5Q9NRN9 209 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TXLNGQ9NUQ3 528 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ABI2Q9NYB9 513 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 KLHL42Q9P2K6 505 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF69Q9UC07 566 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PGAP2Q9UHJ9 254 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 INTUQ9ULD6 942 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF608Q9ULD9 1512 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 GRID1Q9ULK0 1009 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 AGAP1Q9UPQ3 857 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DIS3Q9Y2L1 958 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PPP2R2CQ9Y2T4 447 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 IFT52Q9Y366 437 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 NFE2L3Q9Y4A8 694 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SNX8Q9Y5X2 465 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SBNO1A3KN83 1393 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 MAP3K15Q6ZN16 1313 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 WDR17Q8IZU2 1322 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 LINC00854A0A1B0GVQ3 168 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CCT8L1PA6NM43 557 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 MIF4GDA9UHW6 222 aaKnown RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ERVV-2B6SEH9 535 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ZBTB39O15060 712 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 NCAM2O15394 837 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TRAPPC3O43617 180 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SUPT3HO75486 399 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TOM1L1O75674 476 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ALDH1L1O75891 902 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HMGN1P05114 100 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CEACAM5P06731 702 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ITGA2BP08514 1039 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ALOX5P09917 674 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 UBL4AP11441 157 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 KRT13P13646 458 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 KCNA6P17658 529 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 LMNB1P20700 586 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TBXAS1P24557 533 aaPredicted RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CRABP2P29373 138 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TKTP29401 623 aaKnown RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 VHLP40337 213 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TSPAN7P41732 249 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SLC1A1P43005 524 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 PIP4K2AP48426 406 aaPredicted RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HSPA13P48723 471 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 PDE6CP51160 858 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 USP14P54578 494 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 NUP107P57740 925 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ATP6V0D1P61421 351 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 KRT83P78385 493 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HPCAP84074 193 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ZXDAP98168 799 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ARHGAP4P98171 946 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CAP1Q01518 475 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ZP2Q05996 745 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 MOGSQ13724 837 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HLTFQ14527 1009 aaKnown RBP eCLIP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 VPS72Q15906 364 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 PTPROQ16827 1216 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 IMMTQ16891 758 aaKnown RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 FBXO43Q4G163 708 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HERC4Q5GLZ8 1057 aaPredicted RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TCHHL1Q5QJ38 904 aaPredicted RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 C10orf76Q5T2E6 689 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SNX30Q5VWJ9 437 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SLX4IPQ5VYV7 408 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 OR52E8Q6IFG1 317 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 GIMAP6Q6P9H5 292 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 XKR5Q6UX68 686 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 B3GNT6Q6ZMB0 384 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 STOX1Q6ZVD7 989 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 USP51Q70EK9 711 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 MIER3Q7Z3K6 550 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 PATL1Q86TB9 770 aaKnown RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 FAM228AQ86W67 206 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SFR1Q86XK3 245 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TMEM151BQ8IW70 566 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SCUBE1Q8IWY4 988 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HACE1Q8IYU2 909 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ARHGAP24Q8N264 748 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 FAM181AQ8N9Y4 354 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 GRPEL2Q8TAA5 225 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SLC2A14Q8TDB8 520 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms