RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 BNIP1Q12981 228 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 MTMR2Q13614 643 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 PCNX4Q63HM2 1172 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 SPATA21Q7Z572 469 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 FAM84AQ96KN4 292 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 FBXL18Q96ME1 805 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 LGALS13Q9UHV8 139 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 PHIPQ8WWQ0 1821 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 MYPNQ86TC9 1320 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 DENND3A2RUS2 1198 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 CRELD2Q6UXH1 353 aaPredicted RBP19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 SCYL3Q8IZE3 742 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 SLC17A8Q8NDX2 589 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 ATL2Q8NHH9 583 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 CPA5Q8WXQ8 436 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 DCPSQ96C86 337 aaKnown RBP19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 PRKAG3Q9UGI9 489 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 ARL2BPQ9Y2Y0 163 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 PPP2R3BQ9Y5P8 575 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 OTOFQ9HC10 1997 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 ALDH5A1P51649 535 aaPredicted RBP19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 ZKSCAN8Q15776 578 aaPredicted RBP19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 ACCSLQ4AC99 568 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 C2CD6Q53TS8 623 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 CGB2Q6NT52 195 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 SEPT14Q6ZU15 432 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 SULF1Q8IWU6 871 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 BSNDQ8WZ55 320 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 HEMGNQ9BXL5 484 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 TBK1Q9UHD2 729 aa19.51■□□□□ 0.71
PCDHA1-202ENST00000394633 ADGRA3Q8IWK6 1321 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 O00370 1275 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 IGF2BP3O00425 579 aaKnown RBP eCLIP19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 RALAP11233 206 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 GTF2H1P32780 548 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 SLC1A1P43005 524 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 COPS2P61201 443 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 PSMC5P62195 406 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 GCNT1Q02742 428 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 CENPCQ03188 943 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 KLF1Q13351 362 aaPredicted RBP19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 STAMBPL1Q96FJ0 436 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 TGS1Q96RS0 853 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 FAM118BQ9BPY3 351 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 TBC1D22BQ9NU19 505 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 PNMA3Q9UL41 463 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 NAALADL1Q9UQQ1 740 aa19.5■□□□□ 0.71
PCDHA1-202ENST00000394633 ATP9AO75110 1047 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 CCNE2O96020 404 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 PTPRAP18433 802 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 FITM2Q8N6M3 262 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 GBP7Q8N8V2 638 aaPredicted RBP19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 FAM212AQ96EL1 285 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 KMT5AQ9NQR1 393 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 UMODL1Q5DID0 1318 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 PAPPA2Q9BXP8 1791 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 POTEJP0CG39 1038 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 ALADP13716 330 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 EIF2AK2P19525 551 aaKnown RBP19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 STX2P32856 288 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 DMP1Q13316 513 aaPredicted RBP19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 ENOSF1Q7L5Y1 443 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 SRRM1Q8IYB3 904 aaKnown RBP19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 SYTL5Q8TDW5 730 aaPredicted RBP19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 POMGNT1Q8WZA1 660 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 FAM81BQ96LP2 452 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 MAGEB18Q96M61 343 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 KIAA1683Q9H0B3 1180 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 EBF2Q9HAK2 575 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 ANKEF1Q9NU02 776 aa19.49■□□□□ 0.71
PCDHA1-202ENST00000394633 USP2O75604 605 aaPredicted RBP19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 MYBL1P10243 752 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 SOX10P56693 466 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 PTP4A2Q12974 167 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 EAPPQ56P03 285 aaPredicted RBP19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 AGAP11Q8TF27 550 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 C9orf72Q96LT7 481 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 RMDN2Q96LZ7 410 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 TAAR1Q96RJ0 339 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 RXFP1Q9HBX9 757 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 EURLQ9NYK6 297 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 CDH16O75309 829 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 PROSCO94903 275 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 TAS2R40P59535 323 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 GHRHRQ02643 423 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 ADCY1Q08828 1119 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 MGAT5Q09328 741 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 MKRN3Q13064 507 aaKnown RBP19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 SUPT20HL1Q3ZLR7 823 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 TMEM63BQ5T3F8 832 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 IZUMO3Q5VZ72 239 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 L3MBTL1Q9Y468 752 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 SCN4AP35499 1836 aa19.48■□□□□ 0.71
PCDHA1-202ENST00000394633 KRT16P08779 473 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 CCNG2Q16589 344 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 ARHGEF18Q6ZSZ5 1173 aa19.47■□□□□ 0.71
PCDHA1-202ENST00000394633 USP50Q70EL3 339 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms