RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TFAP2CQ92754 450 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 MPHOSPH9Q99550 1183 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 P2RX7Q99572 595 aaKnown RBP3.87□□□□□ -1.79
PTPRC-205ENST00000391970 CPPED1Q9BRF8 314 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-205ENST00000391970 CHMP4AQ9BY43 222 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 DPH1Q9BZG8 443 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 XYLT2Q9H1B5 865 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 ADAM7Q9H2U9 754 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 BRD9Q9H8M2 597 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 KIAA1586Q9HCI6 787 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 NLRC4Q9NPP4 1024 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 SLAMF7Q9NQ25 335 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-205ENST00000391970 STK32BQ9NY57 414 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-205ENST00000391970 CFAP97Q9P2B7 532 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 HECAQ9UBI9 543 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-205ENST00000391970 TAGLN3Q9UI15 199 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 OGDHLQ9ULD0 1010 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 CORO2BQ9UQ03 480 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 CLCA2Q9UQC9 943 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 HDAC5Q9UQL6 1122 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 RIPOR2Q9Y4F9 1068 aa3.87□□□□□ -1.79
PTPRC-205ENST00000391970 ARID1BQ8NFD5 2236 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-205ENST00000391970 NPEPPSL1A6NEC2 478 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 PLEKHD1A6NEE1 506 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 OTOL1A6NHN0 477 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 KPNA5O15131 536 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 GPR42O15529 346 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ANXA1P04083 346 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 GJB1P08034 283 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 RARBP10826 455 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ZKSCAN1P17029 563 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 MSX2P35548 267 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 PHKA1P46020 1223 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SUMO3P55854 103 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 FMO1Q01740 532 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ZNF543Q08ER8 600 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 UBXN2BQ14CS0 331 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ELAVL1Q15717 326 aaKnown RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 LONRF3Q496Y0 759 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 DCAF17Q5H9S7 520 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 EFCAB12Q6NXP0 572 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 DRICH1Q6PGQ1 229 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SESTD1Q86VW0 696 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SIAH1Q8IUQ4 282 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 D2HGDHQ8N465 521 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 OR2C3Q8N628 320 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 RNF169Q8NCN4 708 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SUCLG2Q96I99 432 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 MSLNLQ96KJ4 702 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SGCZQ96LD1 299 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 CCDC138Q96M89 665 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SSBP3Q9BWW4 388 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 GSTO2Q9H4Y5 243 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ZNF287Q9HBT7 754 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 GPR35Q9HC97 309 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SPON1Q9HCB6 807 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 FNIP2Q9P278 1114 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 CPNE7Q9UBL6 633 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 AFF4Q9UHB7 1163 aaKnown RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SLC45A2Q9UMX9 530 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ZFR2Q9UPR6 939 aaKnown RBP3.86□□□□□ -1.79
PTPRC-205ENST00000391970 DAAM1Q9Y4D1 1078 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 SNX13Q9Y5W8 968 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 ZNF536O15090 1300 aa3.86□□□□□ -1.79
PTPRC-205ENST00000391970 CDHR4A6H8M9 788 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 FOXS1O43638 330 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 MFAP3LO75121 409 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 EIF3JO75822 258 aaKnown RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 AGFG2O95081 481 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 ABHD16AO95870 558 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 SLC6A2P23975 617 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 MGAT1P26572 445 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 KCNJ5P48544 419 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 NOMO3P69849 1222 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 HABP2Q14520 560 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 C10orf62Q5T681 223 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 UTP14CQ5TAP6 766 aaKnown RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 C1QL3Q5VWW1 255 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 ZNF783Q6ZMS7 281 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 POLNQ7Z5Q5 900 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 DPP9Q86TI2 863 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 CIR1Q86X95 450 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 FITM2Q8N6M3 262 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 AOPEPQ8N6M6 819 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 MB21D1Q8N884 522 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 OR10H5Q8NGA6 315 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 OR6B3Q8NGW1 331 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 MAML1Q92585 1016 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 MIEF2Q96C03 454 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 NMD3Q96D46 503 aaKnown RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 ZC3H10Q96K80 434 aaKnown RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 RIPOR3Q96MK2 946 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 ARPC5LQ9BPX5 153 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 UNKQ9C0B0 810 aaKnown RBP3.85□□□□□ -1.79
PTPRC-205ENST00000391970 SMURF2Q9HAU4 748 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 PNPLA8Q9NP80 782 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 PLCB1Q9NQ66 1216 aa3.85□□□□□ -1.79
PTPRC-205ENST00000391970 COL20A1Q9P218 1284 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms