RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LRRIQ3A6PVS8 624 aaPredicted RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 GSTA4O15217 222 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 DGAT1O75907 488 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 FAM228BP0C875 321 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 HIC1Q14526 733 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 NTRK3Q16288 839 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 BTNL9Q6UXG8 535 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 ZNF677Q86XU0 584 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 RHPN2Q8IUC4 686 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 KIRREL3Q8IZU9 778 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 CAVIN3Q969G5 261 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 OSBPL8Q9BZF1 889 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 XAB2Q9HCS7 855 aaKnown RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 MRGBPQ9NV56 204 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 SMARCAL1Q9NZC9 954 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 ZBTB12Q9Y330 459 aaPredicted RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 NEU2Q9Y3R4 380 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 FLT1P17948 1338 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 COMTP21964 271 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TYK2P29597 1187 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 IRX1P78414 480 aaPredicted RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 PIGHQ14442 188 aaPredicted RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 SLC29A2Q14542 456 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 RABGAP1LQ5R372 815 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 RARS2Q5T160 578 aaKnown RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 RGS9BPQ6ZS82 235 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 DDX42Q86XP3 938 aaKnown RBP eCLIP8.85□□□□□ -0.99
VPS36-201ENST00000378060 CERS5Q8N5B7 392 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 RNF139Q8WU17 664 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 C9orf72Q96LT7 481 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 SH3GL3Q99963 347 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 SENP7Q9BQF6 1050 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TSSK1BQ9BXA7 367 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 LACRTQ9GZZ8 138 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 GTF3C4Q9UKN8 822 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 FIS1Q9Y3D6 152 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 PMLP29590 882 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 SARSP49591 514 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 SERPINB9P50453 376 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 CDH6P55285 790 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 EIF3EP60228 445 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 PPP4CP60510 307 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 MAPK7Q13164 816 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 MAPRE2Q15555 327 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 LONRF1Q17RB8 773 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 ITPRIPL1Q6GPH6 555 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 SWSAP1Q6NVH7 229 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 PRPF31Q8WWY3 499 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 ABTB1Q969K4 478 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 FGD4Q96M96 766 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 RIT2Q99578 217 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 KIFC3Q9BVG8 833 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 FRMD8Q9BZ67 464 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 MAGEB5Q9BZ81 275 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 POLR3FQ9H1D9 316 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 SLC24A3Q9HC58 644 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 ZNF302Q9NR11 478 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 DMGDHQ9UI17 866 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 DBR1Q9UK59 544 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 NPHP3-ACAD11A0A0J9YXS1 232 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 TYW5A2RUC4 315 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 PPP1R12AO14974 1030 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 EEF1DP29692 281 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 PPARGP37231 505 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 KLK7P49862 253 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 TBX2Q13207 712 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 GPR162Q16538 588 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 KYAT1Q16773 422 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 CXorf38Q8TB03 319 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 ACTRT1Q8TDG2 376 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 GFM2Q969S9 779 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 C18orf8Q96DM3 657 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 POLR3CQ9BUI4 534 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 RAVER2Q9HCJ3 691 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 SCAF8Q9UPN6 1271 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 MTO1Q9Y2Z2 717 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 MCF2P10911 925 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 MARK3P27448 753 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 YWHABP31946 246 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 CASP2P42575 452 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 MAGEA4P43358 317 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 KYNUQ16719 465 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 P3H1Q32P28 736 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 FAM102AQ5T9C2 384 aaPredicted RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 MTHFD1LQ6UB35 978 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 CATSPER4Q7RTX7 472 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 SLC26A7Q8TE54 656 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 CASKIN2Q8WXE0 1202 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 ERP27Q96DN0 273 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 EIF2AQ9BY44 585 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 SLC13A1Q9BZW2 595 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
VPS36-201ENST00000378060 MRPL46Q9H2W6 279 aaKnown RBP8.84□□□□□ -0.99
VPS36-201ENST00000378060 ANKZF1Q9H8Y5 726 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms