RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SIX1Q15475 284 aaPredicted RBP17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 TRIP13Q15645 432 aaPredicted RBP17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 MAPK6Q16659 721 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 ZDHHC24Q6UX98 284 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 MON1BQ7L1V2 547 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 ATP6V1G3Q96LB4 118 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 ZDHHC18Q9NUE0 388 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 LCMT1Q9UIC8 334 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 DCDC2CA8MYV0 355 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CXCL11O14625 94 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CYP1A1P04798 512 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 BRD2P25440 801 aaKnown RBP17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CHRNA3P32297 505 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 NOMO3P69849 1222 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CENPCQ03188 943 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 PDE4CQ08493 712 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 ORC1Q13415 861 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CCDC50Q8IVM0 306 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 BRSK2Q8IWQ3 736 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 ABRAQ8N0Z2 381 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 GOLGA6L10A6NI86 522 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 SMIM23A6NLE4 172 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 SHBGP04278 402 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 IQCF3P0C7M6 154 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 MYZAPP0CAP1 466 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 NR1D1P20393 614 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 ABCD1P33897 745 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 COILP38432 576 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 IER5Q5VY09 327 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 EFCAB12Q6NXP0 572 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 TMBIM4Q9HC24 238 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 CHST7Q9NS84 486 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 GRHL1Q9NZI5 618 aa17.04■□□□□ 0.32
CNKSR1-202ENST00000374253 SHOX2O60902 331 aaPredicted RBP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 SLC25A27O95847 323 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 TAS2R40P59535 323 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 DHX34Q14147 1143 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 ZBTB8OSQ8IWT0 167 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 IMPG2Q9BZV3 1241 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 KRT19P08727 400 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 TCF4P15884 667 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 RAP1GAPP47736 663 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 BPIFB4P59827 614 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 RPL7AP62424 266 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 ZNF568Q3ZCX4 644 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 CD302Q8IX05 232 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 EFCAB13Q8IY85 973 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 EIF1ADQ8N9N8 165 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 ZNF606Q8WXB4 792 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 FAM167AQ96KS9 214 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 NXF1Q9UBU9 619 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 RASAL2Q9UJF2 1139 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 MTUS1Q9ULD2 1270 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 KCNH4Q9UQ05 1017 aa17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 R3HDM2Q9Y2K5 976 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-202ENST00000374253 DNAJC25-GNG10A0A024R161 153 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 EPHX2P34913 555 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 VPS41P49754 854 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 EFNA5P52803 228 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 PPIL2Q13356 520 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 MAMLD1Q13495 774 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 ATP13A4Q4VNC1 1196 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 CCDC62Q6P9F0 684 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 ZPBP2Q6X784 338 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 CCDC25Q86WR0 208 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 C1orf131Q8NDD1 294 aaKnown RBP17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 CEP350Q5VT06 3117 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 SIP14410 1827 aa17.02■□□□□ 0.32
CNKSR1-202ENST00000374253 FAM187AA6NFU0 413 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 ABLIM1O14639 778 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 OGTO15294 1046 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 ASS1P00966 412 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 CXCL8P10145 99 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 FGFR4P22455 802 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 IFFO1Q0D2I5 559 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 PPP1R7Q15435 360 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 KRT71Q3SY84 523 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 ANKS1BQ7Z6G8 1248 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 ZNF677Q86XU0 584 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 MORC4Q8TE76 937 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 ACSF2Q96CM8 615 aaPredicted RBP17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 DNAJC17Q9NVM6 304 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 PCYOX1Q9UHG3 505 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 POLIQ9UNA4 740 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 LRRC37A2A6NM11 1700 aa17.02■□□□□ 0.31
CNKSR1-202ENST00000374253 PI4K2BG5E9Z4 385 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 ZNF286BP0CG31 522 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 OSBPP22059 807 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 TMOD1P28289 359 aa17.01■□□□□ 0.31
CNKSR1-202ENST00000374253 CCT5P48643 541 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms