RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 AFF2P51816 1311 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 PXDNQ92626 1479 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 RARAP10276 462 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 PYGMP11217 842 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC20A1Q8WUM9 679 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 FAM192AQ9GZU8 254 aa16.82■□□□□ 0.28
CLSTN1-201ENST00000361311 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 RNF103-CHMP3A0A140T963 221 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 MED24O75448 989 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 DUPD1Q68J44 220 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 EXOC3L1Q86VI1 746 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 PIK3R5Q8WYR1 880 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 AGPAT3Q9NRZ7 376 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 GTPBP10A4D1E9 387 aaKnown RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 PPP6R3Q5H9R7 873 aaPredicted RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 WLSQ5T9L3 541 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC7A3Q8WY07 619 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 ZNF184Q99676 751 aaPredicted RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 NUDT12Q9BQG2 462 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 KIAA1683Q9H0B3 1180 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 LIN7AO14910 233 aaPredicted RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 EIF3EP60228 445 aaKnown RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 RASA2Q15283 850 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 RNF43Q68DV7 783 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 AGR3Q8TD06 166 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 TMEM120AQ9BXJ8 343 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 A8MUI8 341 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 SGPL1O95470 568 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 ROR1Q01973 937 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 TRMT5Q32P41 509 aaKnown RBP16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 CD209Q9NNX6 404 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 NINJ2Q9NZG7 142 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
CLSTN1-201ENST00000361311 PABPN1LA6NDY0 278 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 GIT2Q14161 759 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 PDZD4Q76G19 769 aaPredicted RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 PPP2R3CQ969Q6 453 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 HDAC11Q96DB2 347 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 ARHGEF26Q96DR7 871 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 CCDC97Q96F63 343 aaPredicted RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 MSTO1Q9BUK6 570 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 SHCBP1LQ9BZQ2 653 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 XPO7Q9UIA9 1087 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 K7ERI5 159 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 P4HBP07237 508 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 GZMAP12544 262 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 DRG2P55039 364 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 BLMHQ13867 455 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 CMTM5Q96DZ9 223 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 TTYH3Q9C0H2 523 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 TBC1D23Q9NUY8 699 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 WARS2Q9UGM6 360 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 SNRPAP09012 282 aaKnown RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 FAM200BP0CF97 657 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 TYK2P29597 1187 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 GSTT1P30711 240 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 PRKCIP41743 596 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 PCYT1AP49585 367 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 GRAPQ13588 217 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 EPHA7Q15375 998 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 CHI3L2Q15782 390 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 EAPPQ56P03 285 aaPredicted RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 MCUQ8NE86 351 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 EME1Q96AY2 570 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 SENP7Q9BQF6 1050 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 PCMTD2Q9NV79 361 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 STRIP2Q9ULQ0 834 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLSTN1-201ENST00000361311 SYNJ2BP-COX16A0A087WUM0 186 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 MTERF2Q49AM1 385 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 TMEM259Q4ZIN3 620 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 KRT35Q92764 455 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC5A5Q92911 643 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 CCT7Q99832 543 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 NEUROG2Q9H2A3 272 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 KIAA1586Q9HCI6 787 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 SAR1AQ9NR31 198 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.283e-9■■□□□ 13.3
CLSTN1-201ENST00000361311 COX16Q9P0S2 106 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
CLSTN1-201ENST00000361311 P4HA2O15460 535 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms