RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 CYP1A1P04798 512 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 CCDC70Q6NSX1 233 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 TRPV1Q8NER1 839 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 ADPGKQ9BRR6 497 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 SELENOOQ9BVL4 669 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 NUP85Q9BW27 656 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 ARFGAP3Q9NP61 516 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 CHORDC1Q9UHD1 332 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 TMEM110-MUSTN1A8MSY1 372 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 THAP12O43422 761 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 ERLIN1O75477 346 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 KRT19P08727 400 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 AKR1A1P14550 325 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 FCGRTP55899 365 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 CDC42EP1Q00587 391 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 SLC10A6Q3KNW5 377 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 NAA35Q5VZE5 725 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 SCARA5Q6ZMJ2 495 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 TRIM72Q6ZMU5 477 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 ARHGAP39Q9C0H5 1083 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 CNOT8Q9UFF9 292 aaKnown RBP13.31□□□□□ -0.28
ZNF548-201ENST00000336128 GINS2Q9Y248 185 aa13.31□□□□□ -0.28
ZNF548-201ENST00000336128 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CFHP08603 1231 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CD58P19256 250 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 ASPAP45381 313 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 ADAM17P78536 824 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 DCAF4L1Q3SXM0 396 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CATSPER4Q7RTX7 472 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 TMEM130Q8N3G9 435 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 C1orf127Q8N9H9 656 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 USP38Q8NB14 1042 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 SMC1BQ8NDV3 1235 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 ACTRT1Q8TDG2 376 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 HNRNPLLQ8WVV9 542 aaKnown RBP13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CPA5Q8WXQ8 436 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 HHIPL1Q96JK4 782 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 ACAP3Q96P50 834 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 OSMRQ99650 979 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 LRRC1Q9BTT6 524 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 KATNAL1Q9BW62 490 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 ASB7Q9H672 318 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CDHR5Q9HBB8 845 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CISHQ9NSE2 258 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 UVRAGQ9P2Y5 699 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 POLIQ9UNA4 740 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 NPTXRO95502 500 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 MYBL1P10243 752 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-201ENST00000336128 GRM5P41594 1212 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 PSMC4P43686 418 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CENPCQ03188 943 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 MESDQ14696 234 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 LONRF2Q1L5Z9 754 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-201ENST00000336128 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 DNAJB3Q8WWF6 145 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 CYFIP2Q96F07 1278 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 TRIM11Q96F44 468 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 AVENQ9NQS1 362 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-201ENST00000336128 GABRQQ9UN88 632 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 ALG6Q9Y672 507 aa13.3□□□□□ -0.28
ZNF548-201ENST00000336128 MYADML2A6NDP7 307 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 TREHO43280 583 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 ITGB3P05106 788 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 CYBAP13498 195 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 DARSP14868 501 aaKnown RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 MCM3P25205 808 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 NSFP46459 744 aaKnown RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 YWHAEP62258 255 aaKnown RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 NOMO3P69849 1222 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 ZNF200P98182 395 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 TMEM132DQ14C87 1099 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
ZNF548-201ENST00000336128 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 NXF1Q9UBU9 619 aaKnown RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
ZNF548-201ENST00000336128 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
ZNF548-201ENST00000336128 KIF3CO14782 793 aa13.28□□□□□ -0.28
ZNF548-201ENST00000336128 DUSP11O75319 330 aaKnown RBP13.28□□□□□ -0.28
ZNF548-201ENST00000336128 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
ZNF548-201ENST00000336128 COMTP21964 271 aa13.28□□□□□ -0.28
ZNF548-201ENST00000336128 HOXA11P31270 313 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-201ENST00000336128 PURAQ00577 322 aaKnown RBP13.28□□□□□ -0.28
ZNF548-201ENST00000336128 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-201ENST00000336128 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
ZNF548-201ENST00000336128 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
ZNF548-201ENST00000336128 SMYD5Q6GMV2 418 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms