RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 FEZF2Q8TBJ5 459 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 SMG7Q92540 1137 aaKnown RBP29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 C2CD2Q9Y426 696 aa29.98■■■□□ 2.39
ATPAF1-201ENST00000329231 C2CD4DB7Z1M9 353 aa29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 ZMYND10O75800 440 aa29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 LDHAP00338 332 aaKnown RBP29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 NFICP08651 508 aa29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 SLFN14P0C7P3 912 aa29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 CRELD2Q6UXH1 353 aaPredicted RBP29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 UNC13DQ70J99 1090 aa29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 TDRD5Q8NAT2 981 aaKnown RBP29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 CHAMP1Q96JM3 812 aa29.97■■■□□ 2.39
ATPAF1-201ENST00000329231 IL18RAPO95256 599 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 AFMP43652 599 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 GUCY2FP51841 1108 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 FAM26FQ5R3K3 315 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 RSPO2Q6UXX9 243 aaPredicted RBP29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 HPS3Q969F9 1004 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 ZNF707Q96C28 371 aaPredicted RBP29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 FAM213AQ9BRX8 229 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 PRKD2Q9BZL6 878 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 PIDD1Q9HB75 910 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 PCDHB8Q9UN66 801 aa29.96■■■□□ 2.39
ATPAF1-201ENST00000329231 EIF3DO15371 548 aaKnown RBP eCLIP29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 MRPL58Q14197 206 aaKnown RBP29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 SLC8B1Q6J4K2 584 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 OTOP3Q7RTS5 596 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 PLCD3Q8N3E9 789 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 TMEM130Q8N3G9 435 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 ACSF2Q96CM8 615 aaPredicted RBP29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 BLZF1Q9H2G9 400 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 WDR6Q9NNW5 1121 aaKnown RBP29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 USP25Q9UHP3 1055 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 SERTAD1Q9UHV2 236 aa29.95■■■□□ 2.39
ATPAF1-201ENST00000329231 MTCL1Q9Y4B5 1905 aaKnown RBP29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 A0A1B0GVL5 298 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 PVALEFA0A1B0GWK0 134 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 M0QZQ0 153 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 KIAA0391O15091 583 aaKnown RBP29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 HNRNPA1P09651 372 aaKnown RBP eCLIP29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 PFKFB1P16118 471 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 PAX3P23760 479 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 AARSP49588 968 aaKnown RBP eCLIP29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 ARMCX5Q6P1M9 558 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 RTL10Q7L3V2 364 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 NT5DC4Q86YG4 428 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 ZDHHC14Q8IZN3 488 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 GLIS3Q8NEA6 775 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 SAAL1Q96ER3 474 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 CBWD1Q9BRT8 395 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 C11orf16Q9NQ32 467 aa29.94■■■□□ 2.38
ATPAF1-201ENST00000329231 FAM86C2PA6NEL3 165 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 ACTN4O43707 911 aaKnown RBP29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 TBC1D4O60343 1298 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 C8AP07357 584 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 CASP1P29466 404 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 UVSSAQ2YD98 709 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 CTXN3Q4LDR2 81 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 PPM1LQ5SGD2 360 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 ZNF280DQ6N043 979 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 EDAQ92838 391 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 LRFN3Q9BTN0 628 aa29.93■■■□□ 2.38
ATPAF1-201ENST00000329231 EXTL3O43909 919 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 HOXA9P31269 272 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 EHHADHQ08426 723 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 CUL4BQ13620 913 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 C9orf57Q5W0N0 161 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 DSTYKQ6XUX3 929 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 EPM2AIP1Q7L775 607 aaPredicted RBP29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 BRSK2Q8IWQ3 736 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 ZNF461Q8TAF7 563 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 ZNF507Q8TCN5 953 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 PAGE5Q96GU1 130 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 FBXL5Q9UKA1 691 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 HPSEQ9Y251 543 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 CLUHO75153 1309 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 UBE4BO95155 1302 aa29.92■■■□□ 2.38
ATPAF1-201ENST00000329231 LILRA4P59901 499 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 NUCB2P80303 420 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 ROR1Q01973 937 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 PTPN21Q16825 1174 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 GRAMD1CQ8IYS0 662 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 ZSWIM2Q8NEG5 633 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 SLC7A14Q8TBB6 771 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 PCIF1Q9H4Z3 704 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 DPP3Q9NY33 737 aa29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 RBAKQ9NYW8 714 aaPredicted RBP29.91■■■□□ 2.38
ATPAF1-201ENST00000329231 ANO9A1A5B4 782 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 PRR33A8MZF0 331 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 PIRO00625 290 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 PPEF2O14830 753 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 XYLBO75191 536 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 ARPP19P56211 112 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 ZXDAP98168 799 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 YWHAHQ04917 246 aaPredicted RBP29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 USP37Q86T82 979 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 GPD1LQ8N335 351 aa29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 NOC3LQ8WTT2 800 aaKnown RBP29.9■■■□□ 2.38
ATPAF1-201ENST00000329231 OXCT2Q9BYC2 517 aaPredicted RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms