RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 YIPF2Q9BWQ6 316 aa11.53□□□□□ -0.56
CASP3-201ENST00000308394 SPTLC3Q9NUV7 552 aa11.53□□□□□ -0.56
CASP3-201ENST00000308394 ARHGAP20Q9P2F6 1191 aa11.53□□□□□ -0.56
CASP3-201ENST00000308394 BLOC1S6Q9UL45 172 aa11.53□□□□□ -0.56
CASP3-201ENST00000308394 PIN4Q9Y237 131 aaKnown RBP11.53□□□□□ -0.56
CASP3-201ENST00000308394 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
CASP3-201ENST00000308394 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 NDUFA10O95299 355 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 NPTXRO95502 500 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 PNMA6AP0CW24 399 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 HOXA11P31270 313 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 CYLC1P35663 651 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 MRPS6P82932 125 aaKnown RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 TFAMQ00059 246 aaKnown RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 PCBP1Q15365 356 aaKnown RBP eCLIP11.52□□□□□ -0.57
CASP3-201ENST00000308394 SURF1Q15526 300 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 TDRD10Q5VZ19 366 aaKnown RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 NOTUMQ6P988 496 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 SESTD1Q86VW0 696 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 ARHGEF19Q8IW93 802 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 OR5B17Q8NGF7 314 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 SYN2Q92777 582 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 WNT8BQ93098 351 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 PPP1R13BQ96KQ4 1090 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 PI4K2AQ9BTU6 479 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 STK33Q9BYT3 514 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 UNC93B1Q9H1C4 597 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 TRMT13Q9NUP7 481 aaKnown RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 COQ4Q9Y3A0 265 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 CLTAP09496 248 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 THPOP40225 353 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 TBX4P57082 545 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 CDK17Q00537 523 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 KLHL30Q0D2K2 578 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 DRAP1Q14919 205 aaPredicted RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 ZACNQ401N2 412 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 WDR49Q8IV35 697 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 TSEN34Q9BSV6 310 aaKnown RBP11.52□□□□□ -0.57
CASP3-201ENST00000308394 STARD7Q9NQZ5 370 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 AIPL1Q9NZN9 384 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 ADGRG1Q9Y653 693 aa11.52□□□□□ -0.57
CASP3-201ENST00000308394 KBTBD13C9JR72 458 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 AKR1B10O60218 316 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 GFPT2O94808 682 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 SERPING1P05155 500 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 EIF4A3P38919 411 aaKnown RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 STAT1P42224 750 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 GSCP56915 257 aaPredicted RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 JAM2P57087 298 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 MTFR1Q15390 333 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 DUOXA2Q1HG44 320 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 WDR44Q5JSH3 913 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 SLC27A1Q6PCB7 646 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 C15orf39Q6ZRI6 1047 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 SPACA7Q96KW9 195 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 NT5C1BQ96P26 610 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 ACAP3Q96P50 834 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 IQCGQ9H095 443 aaKnown RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 IP6K2Q9UHH9 426 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 MYO6Q9UM54 1294 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 N6AMT1Q9Y5N5 214 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 TRPV2Q9Y5S1 764 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 F8VZ95 297 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 HLA-DRAP01903 254 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 TMEM191BP0C7N4 346 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 RFX1P22670 979 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 STIP1P31948 543 aaKnown RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 ZNF132P52740 706 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 AP3M2P53677 418 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 KYAT1Q16773 422 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 HGSNATQ68CP4 663 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 MYLK4Q86YV6 388 aaPredicted RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 TATDN2Q93075 761 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.51□□□□□ -0.57
CASP3-201ENST00000308394 EIF2AQ9BY44 585 aaKnown RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
CASP3-201ENST00000308394 NOC2LQ9Y3T9 749 aaKnown RBP11.51□□□□□ -0.57
CASP3-201ENST00000308394 LACTBL1A8MY62 500 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 RPS6KA5O75582 802 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 IL18RAPO95256 599 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 AXLP30530 894 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 SOX5P35711 763 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 USP8P40818 1118 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 PTPROQ16827 1216 aa11.5□□□□□ -0.57
CASP3-201ENST00000308394 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
CASP3-201ENST00000308394 IRF2BP2Q7Z5L9 587 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms