RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 HES6Q96HZ4 224 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 CPB2Q96IY4 423 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 PPP1R16BQ96T49 567 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 NAP1L3Q99457 506 aaPredicted RBP20.27■□□□□ 0.84
VBP1-201ENST00000286428 ANKZF1Q9H8Y5 726 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 OSGEPQ9NPF4 335 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 STXBP5LQ9Y2K9 1186 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 MROH7Q68CQ1 1323 aa20.27■□□□□ 0.84
VBP1-201ENST00000286428 BUB1BO60566 1050 aaPredicted RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 KRT19P08727 400 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 DARSP14868 501 aaKnown RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 CLCN6P51797 869 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 GJA9P57773 515 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 MAP9Q49MG5 647 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 LIN9Q5TKA1 542 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 CDR2LQ86X02 465 aaPredicted RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 EFCAB13Q8IY85 973 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 UBL4BQ8N7F7 174 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 CEP120Q8N960 986 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 ZNF653Q96CK0 615 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 PSMB7Q99436 277 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 ARID3AQ99856 593 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 MTG1Q9BT17 334 aaPredicted RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 VRTNQ9H8Y1 702 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 AVENQ9NQS1 362 aaPredicted RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 ITGA11Q9UKX5 1188 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 CYP1A1P04798 512 aaPredicted RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 RHOXF2BP0C7M4 288 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 EIF4BP23588 611 aaKnown RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 PURAQ00577 322 aaKnown RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 TMEM132DQ14C87 1099 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 NOA1Q8NC60 698 aaKnown RBP20.26■□□□□ 0.83
VBP1-201ENST00000286428 ARHGEF26Q96DR7 871 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 RHOXF2Q9BQY4 288 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 ZNF518BQ9C0D4 1074 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 CYP3A43Q9HB55 503 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 LCMT1Q9UIC8 334 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 CEP83Q9Y592 693 aa20.26■□□□□ 0.83
VBP1-201ENST00000286428 PDE2AO00408 941 aaPredicted RBP20.25■□□□□ 0.83
VBP1-201ENST00000286428 THAP12O43422 761 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 CSDE1O75534 798 aaKnown RBP20.25■□□□□ 0.83
VBP1-201ENST00000286428 CENPCQ03188 943 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 RSPH3Q86UC2 560 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 DNAAF5Q86Y56 855 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 MRPL47Q9HD33 250 aaKnown RBP20.25■□□□□ 0.83
VBP1-201ENST00000286428 CISHQ9NSE2 258 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 CNOT8Q9UFF9 292 aaKnown RBP20.25■□□□□ 0.83
VBP1-201ENST00000286428 GINS2Q9Y248 185 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 ZSWIM8A7E2V4 1837 aa20.25■□□□□ 0.83
VBP1-201ENST00000286428 M0QZ92 97 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 MED7O43513 233 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 TOMM70O94826 608 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 LSM8O95777 96 aaKnown RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 STAU1O95793 577 aaKnown RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 TFRCP02786 760 aaKnown RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 C6orf222P0C671 652 aaPredicted RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 RARBP10826 455 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 CYBAP13498 195 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 HOXD10P28358 340 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 ZNF132P52740 706 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 CRYBB1P53674 252 aaPredicted RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 TNNC1P63316 161 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 NKX3-2P78367 333 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 RBP5P82980 135 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 PPP2R5EQ16537 467 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 SLC10A6Q3KNW5 377 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 JADE1Q6IE81 842 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 UBR7Q8N806 425 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 ZNF564Q8TBZ8 553 aaPredicted RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 TRIM6Q9C030 488 aaPredicted RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 XYLT2Q9H1B5 865 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 WNT8AQ9H1J5 351 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 CARD9Q9H257 536 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 ACP6Q9NPH0 428 aa20.24■□□□□ 0.83
VBP1-201ENST00000286428 PACSIN2Q9UNF0 486 aaPredicted RBP20.24■□□□□ 0.83
VBP1-201ENST00000286428 KIF3CO14782 793 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 SEPT4O43236 478 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 FLT3LGP49771 235 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 BEX3Q00994 111 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 GNASQ5JWF2 1037 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 MCOLN2Q8IZK6 566 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 DNAJB3Q8WWF6 145 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.23■□□□□ 0.83
VBP1-201ENST00000286428 NUP85Q9BW27 656 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 PLVAPQ9BX97 442 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 TTC7AQ9ULT0 858 aaPredicted RBP20.23■□□□□ 0.83
VBP1-201ENST00000286428 ALG6Q9Y672 507 aa20.23■□□□□ 0.83
VBP1-201ENST00000286428 CCDC188H7C350 402 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 PGRMC1O00264 195 aaKnown RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 CEP104O60308 925 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 NFICP08651 508 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 HOXC8P31273 242 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 DNA2P51530 1060 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 MYO1EQ12965 1108 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 RASGEF1CQ8N431 466 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 C1orf127Q8N9H9 656 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 ZNF606Q8WXB4 792 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 FAM84AQ96KN4 292 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 OSMRQ99650 979 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 UPF3AQ9H1J1 476 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms