RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W AI5_BETAQ9ZZX0 354 aa1.84□□□□□ -2.11
CAP1YKL007W TOM1Q03280 3268 aa1.84□□□□□ -2.12
CAP1YKL007W COQ1P18900 473 aa1.83□□□□□ -2.12
CAP1YKL007W MRPL25P23369 157 aa1.83□□□□□ -2.12
CAP1YKL007W RPL24BP24000 155 aaKnown RBP1.83□□□□□ -2.12
CAP1YKL007W QRI5P32344 111 aa1.83□□□□□ -2.12
CAP1YKL007W RNP1P32385 249 aa1.83□□□□□ -2.12
CAP1YKL007W GRE3P38715 327 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CAP1YKL007W THO1P40040 218 aaKnown RBP1.83□□□□□ -2.12
CAP1YKL007W GON7P46984 123 aa1.83□□□□□ -2.12
CAP1YKL007W NBP35P52920 328 aa1.83□□□□□ -2.12
CAP1YKL007W USE1P53146 245 aa1.83□□□□□ -2.12
CAP1YKL007W SWS2P53937 143 aa1.83□□□□□ -2.12
CAP1YKL007W ASI3P53983 676 aa1.83□□□□□ -2.12
CAP1YKL007W CDC14Q00684 551 aa1.83□□□□□ -2.12
CAP1YKL007W EBS1Q03466 884 aaKnown RBP1.83□□□□□ -2.12
CAP1YKL007W LOA1Q06508 300 aa1.83□□□□□ -2.12
CAP1YKL007W PST1Q12355 444 aa1.83□□□□□ -2.12
CAP1YKL007W NCB2Q92317 146 aa1.83□□□□□ -2.12
CAP1YKL007W DDP1Q99321 188 aaKnown RBP1.83□□□□□ -2.12
CAP1YKL007W ADH3P07246 375 aaKnown RBP1.82□□□□□ -2.12
CAP1YKL007W POX1P13711 748 aa1.82□□□□□ -2.12
CAP1YKL007W RPB4P20433 221 aaPredicted RBP1.82□□□□□ -2.12
CAP1YKL007W HOM6P31116 359 aaKnown RBP1.82□□□□□ -2.12
CAP1YKL007W GDH2P33327 1092 aaKnown RBP1.82□□□□□ -2.12
CAP1YKL007W SER33P40510 469 aa1.82□□□□□ -2.12
CAP1YKL007W OTU1P43558 301 aa1.82□□□□□ -2.12
CAP1YKL007W PGA2P53903 129 aa1.82□□□□□ -2.12
CAP1YKL007W PEX10Q05568 337 aa1.82□□□□□ -2.12
CAP1YKL007W YCT1Q12235 531 aa1.82□□□□□ -2.12
CAP1YKL007W YPL247CQ12523 523 aa1.82□□□□□ -2.12
CAP1YKL007W YPL119C-AQ3E751 87 aa1.82□□□□□ -2.12
CAP1YKL007W PPH21P23594 369 aa1.81□□□□□ -2.12
CAP1YKL007W PPA2P28239 310 aa1.81□□□□□ -2.12
CAP1YKL007W JEN1P36035 616 aa1.81□□□□□ -2.12
CAP1YKL007W LDB7P38210 180 aa1.81□□□□□ -2.12
CAP1YKL007W CUE1P38428 203 aa1.81□□□□□ -2.12
CAP1YKL007W SMB1P40018 196 aaKnown RBP1.81□□□□□ -2.12
CAP1YKL007W COX15P40086 486 aa1.81□□□□□ -2.12
CAP1YKL007W RSM25P40496 264 aa1.81□□□□□ -2.12
CAP1YKL007W MSS2P40990 351 aa1.81□□□□□ -2.12
CAP1YKL007W HOC1P47124 396 aa1.81□□□□□ -2.12
CAP1YKL007W CGR1P53188 120 aa1.81□□□□□ -2.12
CAP1YKL007W AAH1P53909 347 aa1.81□□□□□ -2.12
CAP1YKL007W INM2Q05533 292 aa1.81□□□□□ -2.12
CAP1YKL007W DCR2Q05924 578 aa1.81□□□□□ -2.12
CAP1YKL007W YPR098CQ06089 161 aa1.81□□□□□ -2.12
CAP1YKL007W RRS1Q08746 203 aaKnown RBP1.81□□□□□ -2.12
CAP1YKL007W FKS1P38631 1876 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W COS2P0CX12 379 aa1.8□□□□□ -2.12
CAP1YKL007W COS3P0CX13 379 aa1.8□□□□□ -2.12
CAP1YKL007W NHP6BP11633 99 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W RPO26P20435 155 aa1.8□□□□□ -2.12
CAP1YKL007W RPS5P26783 225 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W VMA6P32366 345 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W SGE1P33335 543 aa1.8□□□□□ -2.12
CAP1YKL007W MRPL39P36533 70 aa1.8□□□□□ -2.12
CAP1YKL007W MAL32P38158 584 aa1.8□□□□□ -2.12
CAP1YKL007W HEK2P38199 381 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CAP1YKL007W PRE6P40303 254 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W YRB1P41920 201 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W GLG2P47011 380 aa1.8□□□□□ -2.12
CAP1YKL007W YJL028WP47062 111 aa1.8□□□□□ -2.12
CAP1YKL007W RPC17P47076 161 aa1.8□□□□□ -2.12
CAP1YKL007W MAL12P53341 584 aa1.8□□□□□ -2.12
CAP1YKL007W NOP13P53883 403 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CAP1YKL007W TLG1Q03322 224 aa1.8□□□□□ -2.12
CAP1YKL007W PEX12Q04370 399 aa1.8□□□□□ -2.12
CAP1YKL007W YPR147CQ06522 304 aaKnown RBP1.8□□□□□ -2.12
CAP1YKL007W SLD7Q08457 257 aa1.8□□□□□ -2.12
CAP1YKL007W MATALPHA1P0CY06 175 aa1.79□□□□□ -2.12
CAP1YKL007W HMLALPHA1P0CY07 175 aa1.79□□□□□ -2.12
CAP1YKL007W PHO13P19881 312 aa1.79□□□□□ -2.12
CAP1YKL007W SCM4P32564 187 aa1.79□□□□□ -2.12
CAP1YKL007W DOA4P32571 926 aa1.79□□□□□ -2.12
CAP1YKL007W SSO1P32867 290 aa1.79□□□□□ -2.12
CAP1YKL007W YET1P35723 206 aa1.79□□□□□ -2.12
CAP1YKL007W YKT6P36015 200 aaKnown RBP1.79□□□□□ -2.12
CAP1YKL007W VPS21P36017 210 aaKnown RBP1.79□□□□□ -2.12
CAP1YKL007W YOR062CP36025 268 aa1.79□□□□□ -2.12
CAP1YKL007W YHL049CP38722 271 aa1.79□□□□□ -2.12
CAP1YKL007W YJR079WP47126 109 aa1.79□□□□□ -2.12
CAP1YKL007W CAB4P53332 305 aa1.79□□□□□ -2.12
CAP1YKL007W RHO3Q00245 231 aaKnown RBP1.79□□□□□ -2.12
CAP1YKL007W BNA7Q04066 261 aa1.79□□□□□ -2.12
CAP1YKL007W YDR124WQ04608 324 aa1.79□□□□□ -2.12
CAP1YKL007W GEP5Q12393 293 aa1.79□□□□□ -2.12
CAP1YKL007W YKR104WP0CE69 306 aa1.78□□□□□ -2.12
CAP1YKL007W MAK31P23059 88 aa1.78□□□□□ -2.12
CAP1YKL007W PBN1P25580 416 aa1.78□□□□□ -2.12
CAP1YKL007W YKL075CP36083 450 aa1.78□□□□□ -2.12
CAP1YKL007W SSH1P38353 490 aaKnown RBP1.78□□□□□ -2.12
CAP1YKL007W YHR127WP38833 243 aaKnown RBP1.78□□□□□ -2.12
CAP1YKL007W YHB1P39676 399 aaKnown RBP1.78□□□□□ -2.12
CAP1YKL007W YFH7P43591 353 aa1.78□□□□□ -2.12
CAP1YKL007W MDM34P53083 459 aa1.78□□□□□ -2.12
CAP1YKL007W MRH4P53166 561 aa1.78□□□□□ -2.12
CAP1YKL007W SPG4Q04438 115 aa1.78□□□□□ -2.12
CAP1YKL007W COQ10Q08058 207 aa1.78□□□□□ -2.12
CAP1YKL007W RRP40Q08285 240 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms