RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	GPI11	Q06636	219 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YLR358C	O13565	187 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	SIR2	P06700	562 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YBR144C	P34215	104 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YJR096W	P47137	282 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	HSV2	P50079	448 aa	Predicted RBP	4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YIP4	P53093	235 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YGR117C	P53270	476 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YIP3	P53633	176 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	ATP23	P53722	227 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YNL234W	P53857	426 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	ECM7	Q06200	448 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	WHI4	Q07655	649 aa	Known RBP	4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	RAD28	Q12021	506 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YPR027C	Q12079	277 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	WTM2	Q12206	467 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	TAD3	Q9URQ3	322 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YAL064W-B	O13512	126 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	CDC36	P06100	191 aa	Predicted RBP	4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YKL077W	P36081	392 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	PEP8	P40335	379 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	RIM8	P53179	542 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPL21A	Q02753	160 aa	Known RBP	4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	TRS31	Q03337	283 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	POS5	Q06892	414 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	YLR118C	Q12354	227 aa		4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPL21B	Q12672	160 aa	Known RBP	4.13	□□□□□ -1.75
YDR261C-D	YDR261C-D	UBC5	P15732	148 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPL16B	P26785	198 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	ASC1	P38011	319 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	MRPL16	P38064	232 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YBR241C	P38142	488 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	EHT1	P38295	451 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	MTC6	P38849	526 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	FMO1	P38866	432 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	CCS1	P40202	249 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	TY2A-DR2	Q03483	438 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	TY2A-OR2	Q12293	438 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	TY2A-OR1	Q12439	438 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PAU19	P0CE85	124 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PAU21	P0CE86	164 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PAU22	P0CE87	164 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPS4A	P0CX35	261 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPS4B	P0CX36	261 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YCK2	P23292	546 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PAU3	P25610	124 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	ZRT1	P32804	376 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	SDH4	P37298	181 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	VPS73	P53142	486 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YEL009C-A	A0A023PZF2	135 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPS19A	P07280	144 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPS19B	P07281	144 aa	Predicted RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
YDR261C-D	YDR261C-D	CDC26	P14724	124 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	EPT1	P22140	391 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	MAK31	P23059	88 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	ADY2	P25613	283 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YCR090C	P25654	182 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	ERG28	P40030	148 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PAU5	P43575	122 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RRT5	P43607	289 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	NIF3	P53081	288 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RHO3	Q00245	231 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	FRK1	Q03002	865 aa	Predicted RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	ARR2	Q06597	130 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YNR034W-A	Q3E841	98 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	MSB2	P32334	1306 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RNQ1	P25367	405 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	ALG14	P38242	237 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	MPM1	P40364	252 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	FKH1	P40466	484 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PTR3	P43606	678 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	MMS2	P53152	137 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YNL034W	P53963	612 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	YNL018C	P53976	612 aa		4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RRS1	Q08746	203 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	RPS22B	Q3E7Y3	130 aa	Known RBP	4.12	□□□□□ -1.75
YDR261C-D	YDR261C-D	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
YDR261C-D	YDR261C-D	STP1	Q00947	519 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	HEM25	Q07534	307 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	RRT7	Q07829	113 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	SIN3	P22579	1536 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YKL162C	P36052	402 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YFL065C	P43539	102 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	TAD2	P47058	250 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	BNA1	P47096	177 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YMR320W	Q04897	101 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	RRG7	Q08774	242 aa	Predicted RBP	4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YPR203W	Q08994	102 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	BUB3	P26449	341 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YER121W	P40076	114 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YJL218W	P40892	196 aa	Known RBP	4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	ERG25	P53045	309 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	VHT1	P53241	593 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YMR187C	Q03236	431 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	ACM1	Q08981	209 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	AAC1	P04710	309 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	BGL2	P15703	313 aa	Known RBP	4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	KNH1	P50112	268 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	YGR012W	P53206	393 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms