RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TCP11Q8WWU5 503 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 CEP170P1Q96L14 293 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 TMEM209Q96SK2 561 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 IL25Q9H293 177 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 RBM28Q9NW13 759 aaKnown RBP12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 GTSE1Q9NYZ3 720 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 DOCK6Q96HP0 2047 aa12.21□□□□□ -0.46
PTP4A1-207ENST00000639568 TENM4Q6N022 2769 aa12.21□□□□□ -0.46
PTP4A1-207ENST00000639568 ZMYM2Q9UBW7 1377 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 CYSRT1A8MQ03 144 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 PATE3B3GLJ2 98 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 MEFVO15553 781 aaPredicted RBP12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 NPTXRO95502 500 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 THP07101 528 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 GJA1P17302 382 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 FGFR3P22607 806 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 RFC5P40937 340 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 ARPP19P56211 112 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 PSMC5P62195 406 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 ARHGAP29Q52LW3 1261 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 PKN3Q6P5Z2 889 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 SLC27A1Q6PCB7 646 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 ZNF605Q86T29 641 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 SLC5A5Q92911 643 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 LENG9Q96B70 501 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 NUSAP1Q9BXS6 441 aaKnown RBP12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 RAXQ9Y2V3 346 aa12.2□□□□□ -0.46
PTP4A1-207ENST00000639568 CNTNAP5Q8WYK1 1306 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 B3GAT3O94766 335 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 APBB3O95704 486 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 PRB1P04280 392 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 ATF2P15336 505 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 NPEPPSP55786 919 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 ROR1Q01973 937 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 PTH1RQ03431 593 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 TFDP1Q14186 410 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 TEAD2Q15562 447 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 USP39Q53GS9 565 aaKnown RBP12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 FERMT3Q86UX7 667 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 TCEAL8Q8IYN2 117 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 RUFY2Q8WXA3 655 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 GJA10Q969M2 543 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 ZFYVE19Q96K21 471 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 UBL7Q96S82 380 aaPredicted RBP12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 OSBPL3Q9H4L5 887 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 SNTG2Q9NY99 539 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 PPME1Q9Y570 386 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 INSL5Q9Y5Q6 135 aa12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 MYH9P35579 1960 aaKnown RBP12.19□□□□□ -0.46
PTP4A1-207ENST00000639568 NCANO14594 1321 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 CCDC194A0A1B0GVG4 234 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 TK2O00142 265 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 DKC1O60832 514 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 ABLIM3O94929 683 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 PLA2G2AP14555 144 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 ARF4P18085 180 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 GNA11P29992 359 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 DHPSP49366 369 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 DGKEP52429 567 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 ATXN3P54252 364 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 PTENP60484 403 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 ITPRIPL2Q3MIP1 535 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 SLC8B1Q6J4K2 584 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 PLEKHM2Q8IWE5 1019 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 CCDC12Q8WUD4 166 aaPredicted RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 PIGKQ92643 395 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 RSPRY1Q96DX4 576 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 DHX33Q9H6R0 707 aaKnown RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 THG1LQ9NWX6 298 aaKnown RBP12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 INVSQ9Y283 1065 aa12.18□□□□□ -0.46
PTP4A1-207ENST00000639568 UPK3BL1B0FP48 263 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 UPK3BL2E5RIL1 263 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 MOSPD3O75425 235 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 PSMD10O75832 226 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 TWF1Q12792 350 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 RTN1Q16799 776 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 PMS2CLQ68D20 193 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 PIP4P1Q86T03 277 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 CDR2LQ86X02 465 aaPredicted RBP12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 ARID3BQ8IVW6 561 aaPredicted RBP12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms