RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 GLYCTKQ8IVS8 523 aa6.62□□□□□ -1.35
CDKL5-205ENST00000623535 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
CDKL5-205ENST00000623535 ZSCAN5CA6NGD5 496 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 KRIT1O00522 736 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TLL1O43897 1013 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 MTRF1O75570 445 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 OR6A2O95222 327 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 PGK2P07205 417 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 KELP23276 732 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CHRNA3P32297 505 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 IL9RQ01113 521 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF394Q53GI3 561 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 UBXN6Q9BZV1 441 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CAPN10Q9HC96 672 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ITIH6Q6UXX5 1313 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ZC3H11AO75152 810 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 A1BGP04217 495 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 NFICP08651 508 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CYP2C9P11712 490 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 COPS2P61201 443 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 SLC4A9Q96Q91 983 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TRIM4Q9C037 500 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 BRD8Q9H0E9 1235 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ARL15Q9NXU5 204 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 VPS18Q9P253 973 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ECDO95905 644 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TGFB2P61812 414 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 RCN1Q15293 331 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 MTHFSDQ2M296 383 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TRMT10CQ7L0Y3 403 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 COLGALT2Q8IYK4 626 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 JADE3Q92613 823 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CGRRF1Q99675 332 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF536O15090 1300 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 PIK3CDO00329 1044 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 KRT37O76014 449 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 GH2P01242 217 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 SKILP12757 684 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 SPDYAQ5MJ70 313 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 DNAJC12Q9UKB3 198 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 EDC4Q6P2E9 1401 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 PTPN23Q9H3S7 1636 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TBC1D3BA6NDS4 549 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TTLL8A6PVC2 850 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 EEF1DP29692 281 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ABL2P42684 1182 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 SARSP49591 514 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 PPIGQ13427 754 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 PDAP1Q13442 181 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TRMT11Q7Z4G4 463 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CARD14Q9BXL6 1004 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 IRX2Q9BZI1 471 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 VPS16Q9H269 839 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CRTAC1Q9NQ79 661 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TDRKHQ9Y2W6 561 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 F5H5T6 163 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ARHGEF9O43307 516 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TPD52L2O43399 206 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 PHKA1P46020 1223 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ATP2C1P98194 919 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 TXNRD1Q16881 649 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 BCL2L14Q9BZR8 327 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ADCY9O60503 1353 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 APLP1P51693 650 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CHST13Q8NET6 341 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CEP95Q96GE4 821 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 WDR35Q9P2L0 1181 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 IGSF1Q8N6C5 1336 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 BUB1BO60566 1050 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ACADSBP45954 432 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 FOXD4Q12950 439 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 DPP10Q8N608 796 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CFAP61Q8NHU2 1237 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 LMBRD1Q9NUN5 540 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 MRTO4Q9UKD2 239 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 HSPA4LO95757 839 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 AFPP02771 609 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 STX5Q13190 355 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 HSDL2Q6YN16 418 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 RNF168Q8IYW5 571 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 RBM41Q96IZ5 413 aaKnown RBP6.61□□□□□ -1.35
CDKL5-205ENST00000623535 LRRD1A4D1F6 860 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 M0QYV0 167 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 MTSS1O43312 755 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 COX7A2P14406 83 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 ANGPT1Q15389 498 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 MROH8Q9H579 483 aa6.61□□□□□ -1.35
CDKL5-205ENST00000623535 CLASP2O75122 1294 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ALDH2P05091 517 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GPC1P35052 558 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MUM1Q2TAK8 710 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ATAT1Q5SQI0 421 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CDKL3Q8IVW4 592 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CALML6Q8TD86 181 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GPR101Q96P66 508 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 BRINP2Q9C0B6 783 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms